Gene Hlac_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2600 
Symbol 
ID7399826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2578389 
End bp2578790 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content69% 
IMG OID643709673 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002567242 
Protein GI222481005 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.556264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA CCACTGACGA CGTGCCGGCG GCTGGCGAGC CGGCTCCTGT CGTGAAGCGC 
AGCGGCGAGA TCAGCTACGA AGCGGTCGAC GCCGCCGAGG GGCTCCGGAA GGGCGTCCTC
CTCGACGAGT CGGACGGCGC CCCGAACTTC GCGATGCGGC GGTTCGAGCT CGCGGCCGGC
GCCGCGGTCC CGCGTCACAC GAACGCGGTC GAACACGAGC AGTACGTGCT CGCGGGCGAG
TACGTCGTCG GTATCGGCGA GGAAGAGCAC GCTGTCGAGC CCGGTGACGC CCTCCTGATT
CCGGCGGGCG TCGAGCACTG GTACCGGAAC GAGAGCGAGG AGCCGGGAGC GTTCATCTGC
GTGGTGCCGA ACGGGGACGA CGAGATCGAA CTGGTCGAGT AA
 
Protein sequence
MSNTTDDVPA AGEPAPVVKR SGEISYEAVD AAEGLRKGVL LDESDGAPNF AMRRFELAAG 
AAVPRHTNAV EHEQYVLAGE YVVGIGEEEH AVEPGDALLI PAGVEHWYRN ESEEPGAFIC
VVPNGDDEIE LVE