Gene Hlac_2574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2574 
Symbol 
ID7399799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2550618 
End bp2551490 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content65% 
IMG OID643709646 
Productheat shock protein HtpX 
Protein accessionYP_002567216 
Protein GI222480979 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGGA AGACGGATTG GGGATTACGT GGACGGATGG GGTTCACGAT GTTCCTGCTC 
TTCGCCCTCT ACGTCGTGTT CATCGGTGTC CTGATCGAGG TATTCAACGT CGAGATCATC
TTCACCCTCG CGATGTTCGG CGCGTTCTCG TTCGCCCAGT ACTTCTTCAG CGACAAGCTC
GCCCTGCGGA GCATGGGCGC TCGCAAGGTG AGCCCCGAGG AGTATCCGGA TCTGCACCGA
CGGGTCGAGC GCCTGAGCCA GCAGGCCGAT CTCCCGAAGC CGACCGTCGC CGTCGCCGAC
ACGCAGGTGC CGAACGCGTT CGCGACCGGC CGGAACAAGA AGAACGCGAC CGTCGCCGTG
ACCACCGGCC TGCTCCGAGC GCTCGACGAC GACGAGCTCG ACGGCGTGCT CGCCCACGAG
CTCGCGCACG TGAAGAACCG CGACGTGATG GTGATGACCA TCGCGTCGTT CCTCTCGACG
ATCGCCTTCT TCATCGTGCG GTGGGGATGG CTGTTCAGCG GCGACAACCG GCAGGGCGCG
CCCGTCATCG TCGCAATCGT CGTGTCGATC CTCGTCTGGA TCGTCTCGTT CCTGCTCATT
CGCGCGCTGT CGCGGTACCG CGAGTACTCG GCCGACCGTG GCGCGGCGCT CATCACGGGG
AAGCCCGGCG CGCTCGCCTC GGCGCTGATG ACGATCGACG GCCGGATGGA CCGCGTACCC
AAGGAGGACC TCCGCGAGGA GGCGGAGATG AACGCGTTCT TCATCATCCC GATCAAGGCG
GGGTTCGTCG GCAAGATCGC CTCGACGCAC CCCCCGACGG AGAGCCGGAT CGAGCGGCTC
CGCGACCTCG AACGGGAGAT GGAGACGGCC TGA
 
Protein sequence
MEWKTDWGLR GRMGFTMFLL FALYVVFIGV LIEVFNVEII FTLAMFGAFS FAQYFFSDKL 
ALRSMGARKV SPEEYPDLHR RVERLSQQAD LPKPTVAVAD TQVPNAFATG RNKKNATVAV
TTGLLRALDD DELDGVLAHE LAHVKNRDVM VMTIASFLST IAFFIVRWGW LFSGDNRQGA
PVIVAIVVSI LVWIVSFLLI RALSRYREYS ADRGAALITG KPGALASALM TIDGRMDRVP
KEDLREEAEM NAFFIIPIKA GFVGKIASTH PPTESRIERL RDLEREMETA