Gene Hlac_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2570 
Symbol 
ID7399795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2547020 
End bp2547421 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content58% 
IMG OID643709642 
Producttransposase IS200-family protein 
Protein accessionYP_002567212 
Protein GI222480975 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGACC TCGACTCGGG AGCGCATTCG ACGTTTTCCC TGCACTACCA CCTGATACTC 
ACCACGAAGT ATCGGCGCGG AGTGCTAACC GAGGAGCGAA CCCAATTCAT TCACGAGGTC
ATCGGCGGGT TCACGGACAA CTACGGTGTC GAACTGACGA ACCTCGACGG CGAGGACGAC
CACGTACACA TCCTGTTCCG AGCGAAACCA ACCACGGACC TCGTGAAGTT CATCAACACG
GTCAAGGGCG CAACCGCTCG CCGTATCCGC AACGAGTACG CGGACGAACT GAAAACCGAA
CTGTGGGGCG ACTCGTTCTG GAACGACTCG TACTGCCTCA TCTCGACGGG GCAGGTGTCG
CTGGATGTGT TGAAACAGTA CGTCGAGGAC CAACGCGAGT AG
 
Protein sequence
MYDLDSGAHS TFSLHYHLIL TTKYRRGVLT EERTQFIHEV IGGFTDNYGV ELTNLDGEDD 
HVHILFRAKP TTDLVKFINT VKGATARRIR NEYADELKTE LWGDSFWNDS YCLISTGQVS
LDVLKQYVED QRE