Gene Hlac_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2498 
Symbol 
ID7401550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2474356 
End bp2475654 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content73% 
IMG OID643709570 
ProductThreonyl/alanyl tRNA synthetase SAD 
Protein accessionYP_002567141 
Protein GI222480904 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0615615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.305601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGT CACGCGCGCC GGCGGAACCC GAGGTGCGGG AGTTCGAGGC GACGGTCGAA 
TCGGTCGACG ACCGGGCGAT CGTCCTCGAC GAGACGTACT TCTACGCCGA GTCGGGCGGT
CAGCCAGCGG ATCGGGGAAC GATCGACGGG ATCCTCCTCG CAGACGTGAT CGAGCGCGAC
GGCCGAGTCG TCCACATCCT CGACCAAGAC GCCGAGACGC TTCCCGAGGC CGGCGAGACG
GTCTCGGCGG TCGTCGACGA CGCGTTCCGG ACCTACTGCA CCCGCGCGCA CACCGCCTCA
CACGTCCTGT ACGGCGCGGC ACGCCGGACC TGCGATGACC TCGGCTACGC CGGCTTCGAC
ATCTCGGCGA CGAAGGTTCG CGTCGACCTG ACGACCGCGG AGCCGCTCGA CGACGCGGAC
CTCGTCGAGT TAGAGCGGCT CGCCAACCGG GCCGTCTGGG ACTCGCTCCC GGTGTCGTGG
GAGGCGCTCC CCGAGGACGA GGCCCGCGCG GTCGACGGGA TCGCGTTCAA CACGAAGACC
GAGGAGGGTG CCATGAGCGG CAGCGAGGCG GTTCGCGTCG TGACGGTCGG CGAGCGGGGC
GGCGAGCGCG ACGGGGAACA CGGCGGAGAG AACGCGCCGA CGTGGGACGT GGCCGCCTGC
GGCGGGACCC ACGTCCGGAA CACGAGCGAG ATCGGCCCGA TATCCGTGCT CGACCGGTCG
AACCCCGGCG AGGGCGTGAC CCGCGTGGAG TTCGCGGTGG GGCCGACAGC GATCGACCGC
GAGGCCGCGG TCCACGCGGC AGCGCTCGAC GCGGCGACGG CCCTCGACGC GCAGATCGGG
GACCTCCCGG ACGCGGTCGA CCGGCTCCGA GAGCGAGCCG ACCGGCTCGA AGCCGATCTG
CAGGCCGCCA CGGCCGACCT GCTCGCCGCG CGCCTGCGCG AGTTCCCGGT CAACAACGTC
GACGCCGACG GCGACGATGG CGCGACGTGG GCGGTCGGAA CGGTCGACGA CGCGGACCCG
AACGACCTGC GCGAGCCGGC CCAGCGCGTC CTCGCGGAGG CGGACGCCCC CGACGCGATT
GCGGCGGTCG GGACCGGCGA CTCGCCGTTC GTAGTCGCCG CGGTCGCGGA GGAGGCGGTC
GGTGGGGGAG ATGACGACAA CGCACCCAAT GCCGGCGCAG TCGTGGACGC CGTCACCGAC
GAGTTCGGCG GCGGAGGCGG CGGCGGCCCG ACGTTCGCAC AGGGCGGCGG GCTCGACGCC
GACCCGGACG CCGTCGTCGC GTGGCTCCGC GACCGATGA
 
Protein sequence
MTASRAPAEP EVREFEATVE SVDDRAIVLD ETYFYAESGG QPADRGTIDG ILLADVIERD 
GRVVHILDQD AETLPEAGET VSAVVDDAFR TYCTRAHTAS HVLYGAARRT CDDLGYAGFD
ISATKVRVDL TTAEPLDDAD LVELERLANR AVWDSLPVSW EALPEDEARA VDGIAFNTKT
EEGAMSGSEA VRVVTVGERG GERDGEHGGE NAPTWDVAAC GGTHVRNTSE IGPISVLDRS
NPGEGVTRVE FAVGPTAIDR EAAVHAAALD AATALDAQIG DLPDAVDRLR ERADRLEADL
QAATADLLAA RLREFPVNNV DADGDDGATW AVGTVDDADP NDLREPAQRV LAEADAPDAI
AAVGTGDSPF VVAAVAEEAV GGGDDDNAPN AGAVVDAVTD EFGGGGGGGP TFAQGGGLDA
DPDAVVAWLR DR