| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2492 |
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| Symbol | |
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| ID | 7401544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2468706 |
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| End bp | 2470163 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643709564 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002567135 |
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| Protein GI | 222480898 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.544481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.228664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTCC TCGACCGCGT CGACGCCCTG TTCAAGGGCC CCGATGAGTT CGACCTCACG
TCGGGCGGGA TCGCGAAGCC GCTCTTTTTC CTCTCGATGC CGATCGTCGT CACGAACCTC
TTTCAGACGG CGTACAACCT CGCGGACACG TTCTGGCTGG GGCAGTACAG CACGGACGCG
CTGGCGGCGA TCAGCTTCGC GTTCCCGATG GTGTTCCTGC TGATCTCGCT CGGGATGGGG
ATCTCCGTCG CGGGGAGCGT GCTCGTCGCG CAGTACACCG GCGCGGGCGA GGCCCGGGAG
GCGGAGTACG CCGCCTCGCA GACGGTGACG TTCGCGGTGA TCGCCTCGGT GGTCCTCGGC
GGCGTCGGCT ACTTCTTCGT CGGCGAGTTC CTCGAGTTGA TGGGCGCGTC GGCGGACGTG
TTGCCCCTCG CGGCGAGCTA CATGGAGGTC ATCTCGCTCG GGCTCGTGGC CATGTTCGGC
TTCGCGGTGT TCATCGCGCT CATGCGCGGG TACGGCGACA CGATCACCCC CATGCTCGTG
ATGTTCGGCT CCGTCGTCCT CAACATCGCG CTCGACCCGT TCCTCATCTT CGGCTGGGGG
CCGTTCCCCG CGCTTGGGAT CGAGGGTGCG GCGATCGCGA CCGTGTTCTC TCGGGCGCTG
GCGCTTGTCG TCGGGCTGGC GATCATGTTC CGCGGGGTGC GCGGGGTCCG GATCAACGTC
GCCGACATGG TCCCCGACGC GAGCTACCTG CGCCGGCTCC TCCGCATCGG CCTGCCGGCC
TCGATCGAGG GGACCGGGCG GGCGGTCTCG ATGAACCTCC TGCTTTTCAT CGTCGCGCTG
TTCCCCGACC CGGTCGTCGC CGCCTACGGG ATCGGTACGC GGGTGTTCTC CGTGATTTTC
CTCCCGGCGA TCGCGGTCGC CCGCGGCGTC GAGACGATGA CCGGCCAGAA CATCGGGTCG
GACAAGCCCG ACCGGGCCGA ACGGGCCGCG AACCTGGCGG CCAAGACGCT ATTCGCGGTT
CTCTCGGTCG CCGGCGTCGC CGTCTTCCTC GTCCCCGAGC CGATCGTCTC GGTGTTCGTC
GGCGCGGATC AGGCCGACGC CGGCCGGGTG GTCGCGGTCG GCTCGCAGTT CCTCCGGATC
GTCGCGCTGA CCTTCGGCTT CATCGGCATC ATGCGCGCGT ACACCGGGAG CTTCCGCGGC
GCGGGGAAGA CGCTCACCGC CGCGGCCATC TCGGTGCTGA TGCTCGGCGT CGTCCGGTTC
CCGATCGCGT GGGTCGCCGC CGGTCGGATC GGCGAGACCG GCATCTGGCT GTCGTTCGCG
GTCTCGAACG TCATCGGTGC CGTCGTCGCG TACGCGTGGT ACCGCCGGGG AACCTGGCGG
AGCGGCGACC TCACTGACCG GAGCGCCGCC GGCGACGTCG ACGAGCCGGT GGTGGCCGCG
GAGTCGACGG ACGATTGA
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| Protein sequence | MGLLDRVDAL FKGPDEFDLT SGGIAKPLFF LSMPIVVTNL FQTAYNLADT FWLGQYSTDA
LAAISFAFPM VFLLISLGMG ISVAGSVLVA QYTGAGEARE AEYAASQTVT FAVIASVVLG
GVGYFFVGEF LELMGASADV LPLAASYMEV ISLGLVAMFG FAVFIALMRG YGDTITPMLV
MFGSVVLNIA LDPFLIFGWG PFPALGIEGA AIATVFSRAL ALVVGLAIMF RGVRGVRINV
ADMVPDASYL RRLLRIGLPA SIEGTGRAVS MNLLLFIVAL FPDPVVAAYG IGTRVFSVIF
LPAIAVARGV ETMTGQNIGS DKPDRAERAA NLAAKTLFAV LSVAGVAVFL VPEPIVSVFV
GADQADAGRV VAVGSQFLRI VALTFGFIGI MRAYTGSFRG AGKTLTAAAI SVLMLGVVRF
PIAWVAAGRI GETGIWLSFA VSNVIGAVVA YAWYRRGTWR SGDLTDRSAA GDVDEPVVAA
ESTDD
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