Gene Hlac_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2490 
Symbol 
ID7401542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand- 
Start bp2467801 
End bp2468403 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID643709562 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002567133 
Protein GI222480896 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.375188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.286749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC CATCGGGGCG GACCTTCTCG GACGCGGACG AGGAGATCAT GCGGGCGACC 
TACCGCGCGC TCCGCGAGTA CGGGTACGCC GACCTTACGA TCAAGCGGAT CGCGGCGGAG 
TACGGCAAGT CGACCGCCGC GATACACTAC CACTACGACA CGAAGGAGGA GCTGCTGGCG 
GCGTTTCTCG ACTACATCCT GAACCGGTTC GTCGCCTCCA TCCGCGAGGT CGAGACGACC 
GACCCCGAAG CGCGCCTGAC GGTTCTGCTC GACAAGCTGC TCGTCGCGCC GCAGGAGAAC 
CCGGACCTGT CCGTCGCCCT ACTGGAAATG CGGAGTCAAG CGCCCTACAA CGAGGCGTTC 
GCCGAGCGGT TCCGCCAGAA CGACGAGTAC GTCCGTTACC TGGTCAAGGC CGTCATCAAC 
CACGGCATCG ACGAGGGCGC GTTCGCGGAC GTCGACGCCG ACCGCGTCAC GCGGTCGCTG 
TTGACGATCG TCGACGGCGC CCGCACCCGA TCGGTGGTGT TCGACGACGT CGGCGAGTAC 
GAGAGGGCGC GGGCGACCGC GGCGGAGTAC GTCGACGCGA CGCTCCGTGA GGGCGACGCT 
TAG
 
Protein sequence
MAEPSGRTFS DADEEIMRAT YRALREYGYA DLTIKRIAAE YGKSTAAIHY HYDTKEELLA 
AFLDYILNRF VASIREVETT DPEARLTVLL DKLLVAPQEN PDLSVALLEM RSQAPYNEAF 
AERFRQNDEY VRYLVKAVIN HGIDEGAFAD VDADRVTRSL LTIVDGARTR SVVFDDVGEY 
ERARATAAEY VDATLREGDA