| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2479 |
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| Symbol | |
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| ID | 7401531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2456811 |
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| End bp | 2457962 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643709551 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002567122 |
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| Protein GI | 222480885 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.827266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGT CGCTGTCCGC GCTGTTCGAA GGACTCTCAG CGGTCGAGGC GACGGTCGCA
GTTCTCGTGG TCTCCGTTAT CGCCGCCGTG GGGATGGAGT TCATCGTCCT GCGAGTCGCC
CGCCGGTATG TCTCGACCAC CGACTCCGCG TACGACGACA TCGTCATCTC CTCGCTTCGC
GCCCCGCTCG TCGTCACCGC CGCGCTCGCC GGCGTCTACG TGCTCACGCA GGTCCCGGCG
GTTCGATCGT CCGTGCTCTT GGACCCGCAG CTGCTCGACG CTGTCTTCGG TCGGCCGTCG
CTTTCGGTCA TCATCCTCGT GTGGGCACAT GCCGCCAATA CCGTCGTGAA TCGGCTCGTC
GCCGCCGTCA ACGAGGAAGG CACCCGGTTC GACTTCGCGC CCGTGTTCTC GAACGTCTGG
ACGCTCGCGG TACTTATCGG GAGCGTCGGG ACGCTGCTGT GGCTGTGGGG CATCGAGATT
ACGCCGCTCC TCGGCGCGGC CGGGGTCGCC GGCATCGCGG TCGGTTTCGC CGCGAAAGAC
ACGGTCGCGA ACTTCTTCGG CGGCATTGCG TTGTACTTCG ACGACACCTA CAAAATAAGC
GACTACATCG TTCTCGACGA CGGTACCGCG GGAACCGTGA TCAAGGTCGG CGTGCGCTCG
ACGACGCTGC TCACCCGCGA TGAGGTGCTG GTGACGGTCC CTAACGCGGC GCTCAACGCC
GCGAAGGTGA CGAACGAGTC CGCTCCACAG AGCCGGCGTC GCGTCCGGGT CCCGATCGGC
GTCGCCTACG GGACCGACAT CGACGAATTC GAGGCGCTCG CGGTCGAGGC CGCGCTGGCC
GAGCCGCTCG TCCTTGATTC GCCGAAGCCG CGGGCCCGGC TCCGGTCGTT CGGGGACTCG
GCACTCCAGT ACGAGATCCT CTGTTGGGTC AACGGCCCGA CGCGTCGCCG GCGCGCGCAA
CATACACTCA ACCGCGCGCT GTACAAGACG CTGTCCGCGG CCGATATCGA GATTCCGTAC
CCCAAACGCG ACGTGACGGT CACCGCGGCG GACGGATCTG CCACCGATGC CGCTAGCGGA
CAAATGGACA CCCCGTCATC CACCGACGAC GGGACTGCCG CAGCGACGCG CAACGGCGAC
CGGGGCCGGT AA
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| Protein sequence | MIPSLSALFE GLSAVEATVA VLVVSVIAAV GMEFIVLRVA RRYVSTTDSA YDDIVISSLR
APLVVTAALA GVYVLTQVPA VRSSVLLDPQ LLDAVFGRPS LSVIILVWAH AANTVVNRLV
AAVNEEGTRF DFAPVFSNVW TLAVLIGSVG TLLWLWGIEI TPLLGAAGVA GIAVGFAAKD
TVANFFGGIA LYFDDTYKIS DYIVLDDGTA GTVIKVGVRS TTLLTRDEVL VTVPNAALNA
AKVTNESAPQ SRRRVRVPIG VAYGTDIDEF EALAVEAALA EPLVLDSPKP RARLRSFGDS
ALQYEILCWV NGPTRRRRAQ HTLNRALYKT LSAADIEIPY PKRDVTVTAA DGSATDAASG
QMDTPSSTDD GTAAATRNGD RGR
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