Gene Hlac_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2473 
Symbol 
ID7401525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2452436 
End bp2453014 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID643709545 
Productisochorismatase hydrolase 
Protein accessionYP_002567116 
Protein GI222480879 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTACG ACCCGACCGA GACCGCGGTG ATCGTCGTCG ACATGCAGAA CGGGTTCTGT 
CACCCCGACG GGAGCCTCTA CGCCGAGCCG AGCGAGGCGG CGGTCGAGCC GGTGACGGCC
CTCGTCGACC ACGCCCGCGA CGCCGGCGCG AGTATCGTGT ACACCCGGGA CGTGCACCCG
CCCGAGCAGT TCGACGACAC CCACTACTAC GACGAGTTCG ACCGGTGGGG AGAACACGTC
GTCGAGGGGT CGTGGGACGC CGAACTCGTC GCCGAGCTTG ACGTGCGAGA CGAGGACCAC
ATCGTCGAGA AGCACACGTA TGACGCCTTC TACCAAACTG ATTTGGAGGG GTACCTCGAC
ACGCACGGCA TCGACGACCT GCTGATCTGC GGGACGCTCG CCAACGTCTG CGTGCTCCAC
ACCGCCGGCA GTGCCGGGCT CCGCGACTAC CGGCCCGTCG TCGTCGAGGA CGCGCTCGGG
TACATCACCG AGGACCACCG CGAGTACGCG GTCGAGCACG CCGACTGGCT GTTCGGCGAG
ACGGCGACTC ACGAGTCGAT CGGGTTCGAA TCGGCCTGA
 
Protein sequence
MPYDPTETAV IVVDMQNGFC HPDGSLYAEP SEAAVEPVTA LVDHARDAGA SIVYTRDVHP 
PEQFDDTHYY DEFDRWGEHV VEGSWDAELV AELDVRDEDH IVEKHTYDAF YQTDLEGYLD
THGIDDLLIC GTLANVCVLH TAGSAGLRDY RPVVVEDALG YITEDHREYA VEHADWLFGE
TATHESIGFE SA