Gene Hlac_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2471 
Symbol 
ID7401523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2449231 
End bp2450391 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content71% 
IMG OID643709543 
Productnicotinate phosphoribosyltransferase 
Protein accessionYP_002567114 
Protein GI222480877 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1488] Nicotinic acid phosphoribosyltransferase 
TIGRFAM ID[TIGR01513] putative nicotinate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT TCGATATCGT CGACGCGGCC GCGATTCGCG ACGGCCGGGC GACCGACGCG 
TACTTCGAGC GGACCGAGGC CGCCTTGGAA CACGCGGGAC GAAACCCCCG CGTCGTCGCC
GAGGTCACCG CTGACCAATT CCCCGACGGC GACTTCGAGC TGTTCGCCGG GCTGAAAGAC
GCGGTCGCGC TCTTGGAGGG GCGCGATATC GACGTCGACG CGATTCCGGA AGGCCGCCTA
TTCGACGGCG GTCCGGTGAT GCGAATCGAG GGACCGTACC TCACGTTCGC GCGGCTGGAG
ACCTCCCTCC TCGGCTTCCT CTCGCACGCC TCCGGGATGG CGACCGCGGC CCTCGACTGC
CGGGTCGCGG CGCCGGACTC GCAGGTGCTC TCCTTCGGCG CGCGCCACGT CCACCCGTCG
ATGACCGCGG CGGTCGAGCG CTCCGCGCTG GTTGGCGGGT TCGACGGGTT CTCGCACGTC
GCCGCCGGCG ACCTGATCGG CCGGGAGGCC TCGGGGACGA TGCCCCACGC GCTCTCCATC
TGCTTCGGCC GTGGCGAGCA GGAGGCCGCG TGGCGCGCCT TCAACGAGGC CGTCGACGAG
GCGGTCCCGC GGATCGCCCT CTGTGACACC TACTCCGACG AGGTCGACGA AACACTCCGA
GCGGTCGACG CGCTCGGCGA TCGGCTCGAC GGCGTCCGGC TCGACACCAC CGGCTCGCGT
CGCGGCGACT TCCGGCACAT CATTCGGGAA GTGCAGTGGG AGCTGGACGT TCGCGGCCAC
GACGACGTCG ACGTGTACGT CTCCGGCGGG CTCGGGCCGG CCGACCTCCG CGAACTCCGC
GATGTGGTCG ACGGCTTCGG CGTGGGCGGG TACGTCTCGA ACGCCGACCC GGTCGACTTC
GCGCTCGACA TCGTCGCCGT CGAGGGGGAG CCGGCCGCCA AGCGCGGCAA GCTCTCCGGC
GCGAAGGACG TGTATCGCAC CGCTGACGGC GTCCACGCTG TCGGACTAGC CGACCGGTCG
GGTCCCGACG GTGCCGAGTC GCTCATGGAG CCGGTGATCC GCGACGGCGA GGTCGTCGCT
GACGACGCGT TCGACCTCGC GGCCGCGACG GAGCGCGCGC TTGCGGACGC TGAGACCGTC
GGCTACGGGA CGAACGAGTA G
 
Protein sequence
MTEFDIVDAA AIRDGRATDA YFERTEAALE HAGRNPRVVA EVTADQFPDG DFELFAGLKD 
AVALLEGRDI DVDAIPEGRL FDGGPVMRIE GPYLTFARLE TSLLGFLSHA SGMATAALDC
RVAAPDSQVL SFGARHVHPS MTAAVERSAL VGGFDGFSHV AAGDLIGREA SGTMPHALSI
CFGRGEQEAA WRAFNEAVDE AVPRIALCDT YSDEVDETLR AVDALGDRLD GVRLDTTGSR
RGDFRHIIRE VQWELDVRGH DDVDVYVSGG LGPADLRELR DVVDGFGVGG YVSNADPVDF
ALDIVAVEGE PAAKRGKLSG AKDVYRTADG VHAVGLADRS GPDGAESLME PVIRDGEVVA
DDAFDLAAAT ERALADAETV GYGTNE