| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2468 |
|---|
| Symbol | |
|---|
| ID | 7401520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2446282 |
|---|
| End bp | 2447235 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643709540 |
|---|
| Product | Abortive infection protein |
|---|
| Protein accession | YP_002567111 |
|---|
| Protein GI | 222480874 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1266] Predicted metal-dependent membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.846386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC CCTCCCGGGG TGATGCGGGC CCCGACGACG ACGGCGGGAC GGCACCCGAC
GCGACGACCG CAGCGGATGC GACGGTCGGC GACGGCGGCG AACCGGCCGG CGCCGACGAG
GTGGTGGACG CATCGGCGTC CGGATCTCCT GCCGAGGACG ACAGTGGATC CCCGCTGCGG
GCGATCGGGA CAGCGTTCGG GCTCGGTCTT CTCAGTATCC TCATCCTCGT TGTCGTCGCC
ATCGTGGCCG GTGGAGGACT ATCCCTTATC GGGACGGTCA CGGACTGGCA ACCCCCGTTT
GTGGTGCAGG TCATGGTGCC GTTCGCGCTC AGTCAAATCG TCGCGTTCGT CGGTCTCGGC
CTCGCGTACC TGCGGTGGCG GGGCCTCGAC ACCGACGACA TCGTCGCGTA CCTCGGTATC
CGCTGGCCCA GCCCGCTGGA AGCCGTAATT GCCGTCGTCG GGCCGTTCGT GGCGATCGGA
GCTGTGTTCA TCACCCTTAC CGTCGTGACC GGCTTCGTGA CCGAGCCGGC CCCGAACCAG
GGAGCGCAGG TGGCGCTGGA GAATCCCTCG ATCATCCCGG TGATGATCGT GGGAATGCTG
CTGGTCGTCG GCCCGTGCGA GGAGTTCCTC TTCCGCGGCG TCATTCAGAG CCGAGCGCGG
GAGACGTTCT CCGCGGCCCC CGCCATCGTC CTCTCTGCGG CCGTATTCGC CCCGATCCAC
ATCGTCTCGC TCGCCGGCGG CGGGTTCACG GCGATGCTGG CGACGATCAG CATTCTGTTC
GTGCCGGCGC TCTTCTTCGG CGCGGTGTAC GAGTACACCG GAAACCTCGT CGTCGTCGCC
GTGATGCACG GGCTGTACAA CAGCCTGATC CTGACGATGA TCTACATCGC CATCACGTAC
GGCCCCGAGA TGGAGGGTGC GGGACAGGCG GGCACAGCGC TCATCGGAGT GTAG
|
|---|
| Protein sequence | MSDPSRGDAG PDDDGGTAPD ATTAADATVG DGGEPAGADE VVDASASGSP AEDDSGSPLR
AIGTAFGLGL LSILILVVVA IVAGGGLSLI GTVTDWQPPF VVQVMVPFAL SQIVAFVGLG
LAYLRWRGLD TDDIVAYLGI RWPSPLEAVI AVVGPFVAIG AVFITLTVVT GFVTEPAPNQ
GAQVALENPS IIPVMIVGML LVVGPCEEFL FRGVIQSRAR ETFSAAPAIV LSAAVFAPIH
IVSLAGGGFT AMLATISILF VPALFFGAVY EYTGNLVVVA VMHGLYNSLI LTMIYIAITY
GPEMEGAGQA GTALIGV
|
|---|
| |