| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2440 |
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| Symbol | rps17p |
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| ID | 7400558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2422628 |
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| End bp | 2422972 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643709513 |
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| Product | 30S ribosomal protein S17P |
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| Protein accession | YP_002567085 |
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| Protein GI | 222480848 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03630] archaeal ribosomal protein S17P |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.78188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGATAG GAATCGACGT ACCCACGCCT CCGGAGCCAG ACAACCCGGA GGATTACGAC
TACGAGAAGT GCCCGTTTTA CGGGCAGCTC TCCGTCCGCG GCCAGACCCG TGAGGGAACG
GTCGTGTCGA CGGATATGGA AAAGACCGTC ATCGTCGAGC GAGAATACGA CGTGTTCGTA
CCGAAATACG ATCGGTACAT GAAGCGTCGG TCGCGCATCC CGGCCCACGT GCCGGGCGTG
CTCGACTCGC TCGAAGTTGG TGACGAAGTG AAAATCGCGG AGACGCGACC GCTCTCGAAG
ACGAAGTCCC ACGTCGTCGT CGAGAACCTG TCGGGTGATC AGTGA
|
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| Protein sequence | MAIGIDVPTP PEPDNPEDYD YEKCPFYGQL SVRGQTREGT VVSTDMEKTV IVEREYDVFV
PKYDRYMKRR SRIPAHVPGV LDSLEVGDEV KIAETRPLSK TKSHVVVENL SGDQ
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