Gene Hlac_2419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2419 
Symbol 
ID7400537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2408833 
End bp2409831 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content68% 
IMG OID643709492 
Productoxidoreductase domain protein 
Protein accessionYP_002567064 
Protein GI222480827 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTC CAGACAGTCG GCTCACCTTC GGCATCCTCG GGACGGCGGG GATCGCGCGG 
AAAGCCGTCG TCCCGGCGAT CGCGGCGAGC GACCACGCGC TCGGTGCGGT CGCGTCCCGG
GACGGCGAGC GCGCCGAGCG GTTCGCCGAG GAACACGCGA TTCCGCGGAG CTACGACTCG
TACGAGGCGC TGCTCGAAGA CGATGAGATC GACGCGGTGT ACGTCCCGCT CCCGAACGGG
CTCCACGCCG AGTGGACGAA GCGGGCAGCC GACGCCGGAC ATCACGTGCT CTGCGAGAAG
CCGCTCGCGG TCGACGCGGC GGAAGCGCGC GAGGTGACCG ATCACTGCGC GGAGCGGGGC
ATCACCCTGA TGGAGGGGTT TATGTACCGA TATCACCCGC GCACCGAGCG CGCGCTTGAA
CTGGTCGAAC GGGAGTTAGA CGACGTGCGC ACCGTGACCG CAACGTTCCG GTTCCCGCTG
TACGACCGCC CGAACGACGT GCGGCTGGAC CCCGACCTCG CCGGCGGGTC GCTGATGGAC
GTTGGATGTT ACCCCGTTTC AATCGCCAGG GCGGTACTCG GGACGCCTGA CCGGGCGTAC
GCGCACACGC ACGACACCCG TGATGCCGGC GTCGACACGG AGCTCGCGGG CGTGCTAGAG
TACGAGGACG GCCGGTCGGC GCGCGTCGCC TCCGGCTTCG ACACGCAATT GGTCCAGCGC
TACCGGATCG ACGCGACCAA CGGCTGGGTC GCGGTCAAGC AAGCGTTCGA CACACCCGCC
GACGAACCGG TGGAGCTGAC CTACAAGATC GACGGACGGC ACGGCGTCGA GACGTTCGAT
CCCGTTGACC ACTACCGGCT GCAGGTAGAG CACTTCGCTG ATCGCGTCGC CGACGGCGCT
CGCCCGTTGA CCGACGGAAA AGAAGCGGTC GCGAGTATGC GAGTTATCGA CGCGTTATAC
GAGAGTGCCG CCGGAAACGG GTCGGTCGCG GTCGAGTAA
 
Protein sequence
MTTPDSRLTF GILGTAGIAR KAVVPAIAAS DHALGAVASR DGERAERFAE EHAIPRSYDS 
YEALLEDDEI DAVYVPLPNG LHAEWTKRAA DAGHHVLCEK PLAVDAAEAR EVTDHCAERG
ITLMEGFMYR YHPRTERALE LVERELDDVR TVTATFRFPL YDRPNDVRLD PDLAGGSLMD
VGCYPVSIAR AVLGTPDRAY AHTHDTRDAG VDTELAGVLE YEDGRSARVA SGFDTQLVQR
YRIDATNGWV AVKQAFDTPA DEPVELTYKI DGRHGVETFD PVDHYRLQVE HFADRVADGA
RPLTDGKEAV ASMRVIDALY ESAAGNGSVA VE