Gene Hlac_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2406 
Symbol 
ID7400524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2398236 
End bp2398697 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID643709479 
Productcytidyltransferase-related domain protein 
Protein accessionYP_002567051 
Protein GI222480814 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0615] Cytidylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.508544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGG TCGTTGCACA GGGGACCTTC GACCTACTCC ATCCCGGCCA CGTCCATTAT 
CTGGAAGACG CGGCGACGTA CGGCGACGAG CTTCACGCCA TCGTCGCCCG CCGCACCAAC
GTCACCCACA AGCCGGCACC GATCCTCTGT GCCGAACAGC GCCGCGACAT GGTCGCGGCG
CTCACCGCGG TCGACGAGGC CCATCTCGGC CACCCCGAGG ACGTGTTCGT CCCCATCCAG
CGGCTCGACC CCGACGTGAT CGTGTTGGGA TTCGACCAGC ACCACGACGA GGCCGACATC
GCCGCCGCGC TCGCAGAGCG CGGTATCGAC TGCCGGGTTG AGCGCGCCTC GGGCCGCGAT
CCACGGTACG AGGACGAACT GCTCTCCAGC GGCGACATCG TCGATCGGAT CCTGAAACAG
CGCGGATCCG ACTGCGACGG CGCCCGCGAG GGACAACGAT AG
 
Protein sequence
MTRVVAQGTF DLLHPGHVHY LEDAATYGDE LHAIVARRTN VTHKPAPILC AEQRRDMVAA 
LTAVDEAHLG HPEDVFVPIQ RLDPDVIVLG FDQHHDEADI AAALAERGID CRVERASGRD
PRYEDELLSS GDIVDRILKQ RGSDCDGARE GQR