| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2405 |
|---|
| Symbol | |
|---|
| ID | 7400523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2397718 |
|---|
| End bp | 2398239 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643709478 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002567050 |
|---|
| Protein GI | 222480813 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.600019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTGT TCCGCTCGGA CGAACTCCTC GGGATCGCCC GGGAGACCAT GGAGTTCGTC
CTCGAGGCGA GCGAGGAGAG CCACCCCGAC GAGTACATGG GGTTCCTCCG CACGGACGAC
GCCCGGAAGC TCGACCTCGA CCGGGACGGG CAGGTGATAA CCGATGTGCT CGTCATCCCG
GGTACGGAAT CGAACCCGAC GAGTGCCAGC GTCCGCACCC ACATGAAGCC GAACGACATG
CGGGCGGTCG GCTCGGTCCA CTCCCATCCG AACGGTGCGC TCCGGCCGAG CGACGCTGAC
CTCGCGACGT TTGGACAGGG ACAGATCCAT ATCATCGTCG GCGCTCCGTA CGGGTGGGGC
GACTGGAAGG CATTCGACAA CGAGGGCCGA CAGACGACCC TCGACGTGCT CGACGTGGAA
GTGCCCGACG AGCACTTCTT CGATTTTACC CAGGAGGACA TCGATCGCGA GATCGGCGAG
GAACGACGCG ATGACGGTGG CTTCCTCTCG TGGTTCCGAT GA
|
|---|
| Protein sequence | MRLFRSDELL GIARETMEFV LEASEESHPD EYMGFLRTDD ARKLDLDRDG QVITDVLVIP
GTESNPTSAS VRTHMKPNDM RAVGSVHSHP NGALRPSDAD LATFGQGQIH IIVGAPYGWG
DWKAFDNEGR QTTLDVLDVE VPDEHFFDFT QEDIDREIGE ERRDDGGFLS WFR
|
|---|
| |