Gene Hlac_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2398 
Symbol 
ID7400516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2389710 
End bp2390948 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content67% 
IMG OID643709471 
Producttranslation initiation factor IF-2 subunit gamma 
Protein accessionYP_002567043 
Protein GI222480806 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5257] Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAAG TCAACACACA ACCGGAGGTG AACATCGGTC TCGTCGGTCA CGTCGACCAC 
GGGAAGACGA CGCTCGTGCA GGCGTTGTCC GGCTCGTGGA CCGACCAGCA CAGCGAGGAA
ATGAAACGCG GTATCTCCAT CCGGCTGGGG TACGCGGACG CAACGTTCCG GCGCTGTCCC
GGCGTCGACG CGCCCGAGTG TTACACCGTC GACGAGGAGT GCGAGGACGG TTCAGAGAGC
GAGCCGATCC GGACGGTCTC GTTCGTTGAC GCGCCGGGCC ACGAGACGCT GATGGCAACG
ATGCTCTCGG GAGCCTCGAT CATGGACGGA GCCGTGCTCG TCGTGAGCGC AACCGAGGAC
GTCCCGCAGG CGCAGACGGA AGAGCACTTG ATGGCGCTCG ATCTCATCGG GATCGAGAAC
ATCGTCATCG CACAGAACAA GGTCGATTTG GTCGACCGCG ACCGCGCCGT CGACAACTAC
CGCCAGATTC AGGAGTTTGT CGAGGGCACG GTTGCGGAGG ACGCGCCGAT CGTCCCCGTC
TCCGCACAAC AGGAGGTCAA TATGGACCTC CTCATCGACG CGATCGAATC GGAGATCCCG
ACCCCGGATC GCGATCCCGG CGAGAGCGCC CGCATGTACG CGGCCCGCTC GTTCGACATC
AATCGACCGG GCGCGACCGC AGCCGAACTC AAGGGCGGCG TCGTGGGCGG CTCGCTGGTC
AGCGGCGAGC TGTCCGTCGG CGACGGGCTG GAGATCCGGC CGGGTCGCGA GGTCGACGAG
GAGGGGCAAA CGGAGTGGCG CCCCCTCGAA ACGACGGTGC GATCGCTGCA GGCCGGCAGC
AACGATGTCG AGAGCGCCCG ACCGGGCGGG CTGCTCGGCG TCGGAACCGG GCTCGATCCG
AGTCTGACGA AGGGCGACGC GCTCGCGGGA CAGGTCGCCG GCGAGCCCGG CACGCTCCCG
CCGACGCGCA ACGAGTTCGA GATGCAAGTC GATCTCCTCG ACCGCGTCAT CGGCAGTGAG
GAGGGTGACG ACGGCGACGT CGAGGATATC AACACGGGCG AGCCGCTGAT GCTCACGGTC
GGAACCGCGA CGACGGTCGG CGCGGTAACG AGCGCACGCG AGGGCGAGTG CGAGGTGAGC
CTCAAGCGGC CAGTCTGCGC CGAGAAGGGC GCACAGATCG CGATCAACCG GCGCGTCGGC
GCGCGCTGGC GACTCATCGG CGTCGGAACG CTGTCGTAG
 
Protein sequence
MTEVNTQPEV NIGLVGHVDH GKTTLVQALS GSWTDQHSEE MKRGISIRLG YADATFRRCP 
GVDAPECYTV DEECEDGSES EPIRTVSFVD APGHETLMAT MLSGASIMDG AVLVVSATED
VPQAQTEEHL MALDLIGIEN IVIAQNKVDL VDRDRAVDNY RQIQEFVEGT VAEDAPIVPV
SAQQEVNMDL LIDAIESEIP TPDRDPGESA RMYAARSFDI NRPGATAAEL KGGVVGGSLV
SGELSVGDGL EIRPGREVDE EGQTEWRPLE TTVRSLQAGS NDVESARPGG LLGVGTGLDP
SLTKGDALAG QVAGEPGTLP PTRNEFEMQV DLLDRVIGSE EGDDGDVEDI NTGEPLMLTV
GTATTVGAVT SAREGECEVS LKRPVCAEKG AQIAINRRVG ARWRLIGVGT LS