Gene Hlac_2379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2379 
Symbol 
ID7401997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2374257 
End bp2375042 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID643709452 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002567024 
Protein GI222480787 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.173076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.904893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGGG TCACGCACCA CGACCGCGAC ACTGCCTACC GAGTCTCCGA CCGCGGCGGC 
GACGGACCGA CAGTCTGTTT TATCCACGGG AGCGGGGGGA GCAAAGACGT CTGGAAGGCG
CAGGCGCGCG TGAGCGACCG ATTCCCGGTC GTCGCGCTCG ACCTGTCTGG CCACGGCGAC
AGCGGCGACA TCGACGCCTC CGCCGGTCCC GAGGCGCTCG ACGCGTACGC GGACGACGTG
GTCGCCGTCG CGGAGGCGAC GGGAGCGACC GTCCTCTGTG GCAACTCGCT AGGCGGAGCC
GTCGCGCTGC GGGTCGCCTT GGAGCGCGAC CTGCCGCTCG ACGGGCTCGT ACTCGCCGGG
ACGGGTGCGA AGCTCGCCGT CGCTGAACCC CTCCGCGATG CGCTCGCGAC CGACTTCGAC
CGGGTGATCG AGCTGCTCCA CGAGCCCGAT CGGCTGTTCC ACGACGCGCC ACCGGAGTAC
GTCGAACTGT CGCGCGCCGG GATGCGTGAG TGCGGGCGCG CCGTCACCGA ACGCGACTTC
CGCACCTGCC ACGCCTTCGA CGTCCGCGAC CGGCTCGACG AGATCGCGGT GCCGTCGCTC
GCGGTCGTCG GCGAGCATGA CGCGCTCACG CCCGTCGAGT ACCACGATTA CCTCGCAGAC
CGGATCGACG ACTGCGAGCG CGCAGTGATC GAGGGTGCCG CACATCTCGC GATGCTCGAA
CAACCGGACG CGTTCAACAC GGCGCTGGCG GCGTTTTGCT CGCGGCTCTC GCGAGCGTCG
ACGTAG
 
Protein sequence
MERVTHHDRD TAYRVSDRGG DGPTVCFIHG SGGSKDVWKA QARVSDRFPV VALDLSGHGD 
SGDIDASAGP EALDAYADDV VAVAEATGAT VLCGNSLGGA VALRVALERD LPLDGLVLAG
TGAKLAVAEP LRDALATDFD RVIELLHEPD RLFHDAPPEY VELSRAGMRE CGRAVTERDF
RTCHAFDVRD RLDEIAVPSL AVVGEHDALT PVEYHDYLAD RIDDCERAVI EGAAHLAMLE
QPDAFNTALA AFCSRLSRAS T