| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2377 |
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| Symbol | |
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| ID | 7401995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2371502 |
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| End bp | 2373766 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643709450 |
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| Product | AAA family ATPase, CDC48 subfamily |
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| Protein accession | YP_002567022 |
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| Protein GI | 222480785 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0911184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCA CCGTCAGGCC CTTAAAACAG AAGGACGCCG GGCGCCGCCT CGCGGCGATC
GACCGCATCG CCGCCGAGGA GCTCGGACTC TCCGGCGGGG ACATCATCCG CGTCGAGGGA
CCGGACGGCG CCGCGATCGC CCGCGTCTGG CCCGGTTACC CCGAGGACGA CGGGACCGGC
GTTGTGCGCA TCGACGGTCG GCTTCGCCAG GAGGCCGACG TCGGGATCGA CGACCGCGTG
ACCGTCGAGT CGGTCGACGT CTCACGGGCG GAGTCGGTGA CGATCGCGTT CCCGAGCCAG
CTCCGCGTGC GTGGACAGAT ATCTCCGTTC ATCCGCGACA AGCTCTCCGG TCAGCCGGTG
ACTGAGGGGC AGACGATCCG CACGTCGCTC GGCTTCGGGC TGATGGGCGG CCAGTCGCAG
GCGGTGCCGA TGAAGGTCGC CTCGACGACC CCCTCGGGAA CCGTCGTCAT CACCGACGAC
ACCGAGATCG AAATCTCGGA GGTCCCCGCA GAGGAGCTGA CCGGGCCGAG CGAGGCCGGC
GGCTCCGGCG ATGGACCGGA CGTGACCTAC GAGGATATTG GCGGCCTCGA CAACGAACTC
GAACAGGTCC GAGAGATGAT CGAGCTGCCG ATGCGGCACC CGGAGCTGTT CAAGCGGCTC
GGCATCGACC CGCCGAAGGG CGTCCTCCTG CACGGCCCGC CGGGCACGGG GAAGACCCTG
ATCGCCAAGG CCGTCGCCAA CGAGATCGAC GCGAACTTCC ACACAATCTC CGGCCCGGAG
ATCATGTCGA AGTACTACGG CGAGTCGGAG GAGAAGCTCC GTGAGGTGTT CGAGGAGGCG
TCCGAGGAGG CACCCGCGAT CATCTTCATG GACGAGCTTG ACTCCATCGC GCCCAAACGC
GAGGAGGCCG GCGGCGACGT GGAGCGCCGC GTCGTGGCCC AGCTGCTCTC GCTGATGGAC
GGGCTCGAAG AGCGCGGCGA GGTCGTCGTC ATCGGGGCGA CGAACCGCGT CGACGCCATC
GACCCCGCGC TCCGGCGCGG TGGCCGGTTC GACCGCGAGA TCGAGGTCGG CGTCCCCGAC
CGCGACGGGC GCAAGGAGAT CCTGCAGGTC CACACGCGGA ACATGCCGCT CGTGGACGGG
ATCGACCTCG ACGAGTACGC GGAGAACACC CACGGCTTCG TCGGCGCGGA TCTGGAGTCG
CTGGCGAAAG AGTCCGCGAT GCACGCGCTG CGGCGCATCC GTCCCGAACT CGACCTCGAA
AGCGACGAGA TCGACGCCGA CGTGCTGAAC TCCATCCAGG TCACGGAGTC CGACTTCAAG
GAGGCGATGA AGGGGATCGA ACCCTCCGCG CTGCGCGAGG TGTTCGTTGA GGTCCCCGAC
GTCAGCTGGG ACCAGGTCGG GGGCTTGGAG GACACCAAAG AGCGGCTCCG CGAGACGATC
CAGTGGCCGC TCGAGTACCC CGAGGTGTTC GAGGAACTCG ACATGCAGGC CGCCAAGGGC
GTGCTGATGT ACGGCCCGCC GGGCACGGGG AAGACCCTGC TCGCGAAGGC GGTCGCCAAC
GAGAGCGAGT CGAACTTCAT CTCGATCAAG GGGCCCGAGC TGTTGAACAA GTTCGTGGGC
GAGTCCGAGA AGGGTGTCCG CGAGGTGTTC AGCAAGGCTC GCGAGAACGC GCCGACGATC
GTGTTCTTCG ACGAGATCGA TTCGATCGCG ACTGAGCGCG GCAAGAACTC CGGCGACTCC
GGCGTCGGCG AGCGCGTCGT CTCCCAGCTG CTGACGGAGC TCGATGGGCT CGAATCGCTG
GAGGATGTGG TCGTCATCGC GACGACGAAC CGTCCGGACC TGATCGACTC GGCGCTACTC
CGGCCCGGCC GGCTCGACCG CCACGTGCAC GTGCCCGTGC CGGACGAGGA GGCCCGCCGG
AAGATCCTGG AAGTCCACAC CCGGAACAAG CCGCTGGCCG ACGACGTCGA CTTGGACGCC
ATCGCCCGGA AGACCGAGGG CTACGTCGGC GCCGACATCG AAGCGGTGAC CCGCGAGGCG
TCGATGAACG CCTCCCGAGA GCTCATCGGC AGTGTCTCGC GCGAGGAAGT GGGCGAGTCC
GTGGGCAACG TCCGCGTGAC GATGCAGCAC TTCGAGGACG CCTTAGACGA GGTGAACCCG
AGCGTCACTC CCGAGACGCG CGAGCGCTAC GAGGAGATCG AAAAGCAGTT CCGGCGGTCG
GAGGTCAATC GCGAGGAGAC CGAACCCGGC ACCGCGTTCC AGTAA
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| Protein sequence | MNLTVRPLKQ KDAGRRLAAI DRIAAEELGL SGGDIIRVEG PDGAAIARVW PGYPEDDGTG
VVRIDGRLRQ EADVGIDDRV TVESVDVSRA ESVTIAFPSQ LRVRGQISPF IRDKLSGQPV
TEGQTIRTSL GFGLMGGQSQ AVPMKVASTT PSGTVVITDD TEIEISEVPA EELTGPSEAG
GSGDGPDVTY EDIGGLDNEL EQVREMIELP MRHPELFKRL GIDPPKGVLL HGPPGTGKTL
IAKAVANEID ANFHTISGPE IMSKYYGESE EKLREVFEEA SEEAPAIIFM DELDSIAPKR
EEAGGDVERR VVAQLLSLMD GLEERGEVVV IGATNRVDAI DPALRRGGRF DREIEVGVPD
RDGRKEILQV HTRNMPLVDG IDLDEYAENT HGFVGADLES LAKESAMHAL RRIRPELDLE
SDEIDADVLN SIQVTESDFK EAMKGIEPSA LREVFVEVPD VSWDQVGGLE DTKERLRETI
QWPLEYPEVF EELDMQAAKG VLMYGPPGTG KTLLAKAVAN ESESNFISIK GPELLNKFVG
ESEKGVREVF SKARENAPTI VFFDEIDSIA TERGKNSGDS GVGERVVSQL LTELDGLESL
EDVVVIATTN RPDLIDSALL RPGRLDRHVH VPVPDEEARR KILEVHTRNK PLADDVDLDA
IARKTEGYVG ADIEAVTREA SMNASRELIG SVSREEVGES VGNVRVTMQH FEDALDEVNP
SVTPETRERY EEIEKQFRRS EVNREETEPG TAFQ
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