| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2359 |
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| Symbol | |
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| ID | 7401977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2354020 |
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| End bp | 2355333 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643709433 |
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| Product | ribonuclease BN |
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| Protein accession | YP_002567005 |
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| Protein GI | 222480768 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.389707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.121008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCACAC ACTCTCTCGC CTCGATCGAC ACGGTTCGGC GCGTCGTTGA CGTCGCGATC
GACCGACAGG TGACGTTCCT TGCCGCCGCA ATCGCCTATT ACGCGTTCGT CTCGCTGATC
CCGGCGCTCC TGCTGCTCGT CGTCGTCGCG ACCGCCGTCT TCGGGGAGGC GATCGCCGTC
GAGCTCCTGG CGGCGGCCGG CGACTTCCTC ACGCCCGCCG GCCAGGAGGC CGTCGCCGGC
GCGATCTCCT CCGCGGGTGG CCGAACCGGC GCGAGCGTGA TCGGCGTCGC AGTGCTGCTC
TGGTCGACGC TGAAGGTGTT CCGTGGGCTC GACACCGCGT TCGCCGAGCT GTACGGCGTC
AAGGAGCCGC CAGACTTCGT GAAACAGCTC GCCGATGCCG CCTCGGTCGT CCTCGCCGTC
AGCGTCGGTA TCGGCGTGAT GGTCGCCATC GGCGCGTTCG TCGCGGCCGC CGACGTAGTC
CCGGCCGTGG AGGCGGCGAG TATCCTCGTG TTACCGGCGT TCCTCGCGGT CGTCTTCCTC
CCGATGTACT ACCTGCTCCC CGAGCCGGAC ATCGGTCTGC GAGAGGCCCT CCCCGGCGCG
GCCATCGCCG CCGTCGGCTG GACGCTGCTG CAGGCCGGCT TTCAGGTGTA CGCCGCGAGC
GCCGGCCAGT TTCAGGTGTA CGGCGTTATC GGCGGTATCT TACTGCTCGT CACGTGGCTG
TACCTCGCCG CCGTCGTCGT CGTGGTCGGC GGGGTCGTCA ACGTCGTCTT GGCCGGCCGC
GACGAGACGG CCCCTGCAAG CGGCGCCGGC TTGGGTGGTG GGCCGGCGAT CGCCGACGCC
ATGGACCGGC AGTTACAACA CGACCGCGAC CGATCCACGG GTATGAACGG TGAGTCGGAC
GGCGCGGGCG ACGCCGGCGA CGAGGAACGC CCAGCGGGGG CGCCTGACGT GGCGGCGCTA
CAGGAGGAGG TGAGCCGGCT ACGGACGGAG TTCGACGCGT TCGAGGACGA CGTCGAACGG
CGTACCGTCG ACAAGCCGGC CGTCGAATCG GAGCTGAAGC GGTACGTCCG CTCGCGGATG
CGGCGCGGCC ACGCCCGCGG CTGGGGACCG TACCTCGTGC TCCTGTACGG CACGGTGCTG
ATACTCGGCG CATTCTCCTT CCTCGACGGG CTCTACGCCA TCGCCGCGAT GCTCATCTTG
GGGCTGTCGA CGCTAGGACT GTACACCCTC TTTATCATCG TCGGCATCGG GCTCAACCTG
CTCGAAACCC CCGGCAAAGC GCTCGATTAC GCCCGCCATC GGAGCGATGA CTGA
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| Protein sequence | MPTHSLASID TVRRVVDVAI DRQVTFLAAA IAYYAFVSLI PALLLLVVVA TAVFGEAIAV
ELLAAAGDFL TPAGQEAVAG AISSAGGRTG ASVIGVAVLL WSTLKVFRGL DTAFAELYGV
KEPPDFVKQL ADAASVVLAV SVGIGVMVAI GAFVAAADVV PAVEAASILV LPAFLAVVFL
PMYYLLPEPD IGLREALPGA AIAAVGWTLL QAGFQVYAAS AGQFQVYGVI GGILLLVTWL
YLAAVVVVVG GVVNVVLAGR DETAPASGAG LGGGPAIADA MDRQLQHDRD RSTGMNGESD
GAGDAGDEER PAGAPDVAAL QEEVSRLRTE FDAFEDDVER RTVDKPAVES ELKRYVRSRM
RRGHARGWGP YLVLLYGTVL ILGAFSFLDG LYAIAAMLIL GLSTLGLYTL FIIVGIGLNL
LETPGKALDY ARHRSDD
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