Gene Hlac_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2342 
Symbol 
ID7401959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2338409 
End bp2338804 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content67% 
IMG OID643709415 
ProductThioredoxin domain protein 
Protein accessionYP_002566988 
Protein GI222480751 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.81204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.184046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA ATACTGAATC GGGCGCCTCC GAACCTGCGG ACGATGTGTC CGGAAGCAGC 
ACATCCACAG AGGTCCGTCG ACCGGTATCC CTCGCCGACG AGGACGCACT TGATGCGTTT
GTCGCCGACG CGGACGCCGC CGTGATCGAG TTCTACACGG ACGGCTGCGG GATCTGCGCA
AGCATGGAGC CCGTCCTCGG CAACGTCGCC CGCGAGCTTG ACCTCGCCGT CGCCACGGTG
AATCCCCGGG ACGACCCGCC GCTCGTCGAG CGGTTCGACG TGCGGAGCGT CCCGCTGTTC
GTGCTGTTCG TCGACGGCGA GCCGGTCGCA CGCCGCGCGG AGGGGTTCAT CCCCGGCGAC
GATCTCACCG CGTGGATCAC GGACCACGTC GCGTAG
 
Protein sequence
MKNNTESGAS EPADDVSGSS TSTEVRRPVS LADEDALDAF VADADAAVIE FYTDGCGICA 
SMEPVLGNVA RELDLAVATV NPRDDPPLVE RFDVRSVPLF VLFVDGEPVA RRAEGFIPGD
DLTAWITDHV A