Gene Hlac_2317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2317 
Symbol 
ID7401934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2311511 
End bp2312305 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID643709390 
ProductHpcH/HpaI aldolase 
Protein accessionYP_002566963 
Protein GI222480726 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.542769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCTT CCCAACCCGC TAACGACCTC GCCGCGATCC TCGATGACGG CGACGTCGCA 
CTCGGCGTCC TCGATAACAC GTACAGTCCG ACGCTCGTGG AGTTCTACGG CGAACTCGGC
GTCGATTTCG TCTGGCTGGA CTTCGAACAC GGTGGCCCGG ACCCGTGGGA CGGGGGTCAG
TTGGAAGACC TGCTCCGCGC CGGCGAACGA ACGGACGTGG AGCTACTCGT CCGGCTTCCC
GATACCGACC CGACGCTCGT CCGGAAAGCG CTGGACCTCG GCGCGAGAAA CGTGTTCCTC
CCGCGCGTAG AAACCGCCGA AGAAGTCCGA GACGCGGTGC GATCCGCTCG CTTTCGCTAC
GACGATGGCC CCGGCGATCG GGGGCTGGCC TCGCCGCGGG CGTCTCGCTG GGGGCTCGCC
GACGAGTACG TCACCACCGA AGACCGGGAG ACCCTCGTCG GCGTGACCGT CGAGACCGAG
GCGTCCGTCG AGAACCTGGA CGACATTCTC GCTGTCCCGG AGCTGGGATT CGTCTTTATC
GGCCCGTTCG ACCTCTCGGT ATCACTCGGT TATCCCGGTG AAATTGATCA TCCGAAGGTA
CGGGAAGCCG TCGAGACGGT TCGATCGAAG GCCGTCGACG CGGATGTCCC CGTCGGAGGC
CTTGGGTTCG GGATGGATGA TGTCAATGAA AAGGCGGGGA ACGGCTACCA GATGCTGAAC
CTCGGGAGTA CGACTGGGGC GCTCAAACAG ACCGTCACTG GCTGGTTCGA TGCCTATGAA
CAGAACGACG CTTGA
 
Protein sequence
MTASQPANDL AAILDDGDVA LGVLDNTYSP TLVEFYGELG VDFVWLDFEH GGPDPWDGGQ 
LEDLLRAGER TDVELLVRLP DTDPTLVRKA LDLGARNVFL PRVETAEEVR DAVRSARFRY
DDGPGDRGLA SPRASRWGLA DEYVTTEDRE TLVGVTVETE ASVENLDDIL AVPELGFVFI
GPFDLSVSLG YPGEIDHPKV REAVETVRSK AVDADVPVGG LGFGMDDVNE KAGNGYQMLN
LGSTTGALKQ TVTGWFDAYE QNDA