| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2315 |
|---|
| Symbol | |
|---|
| ID | 7401932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2309313 |
|---|
| End bp | 2311034 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643709388 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002566961 |
|---|
| Protein GI | 222480724 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.101982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.971281 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTCA GTCGCGACCG TCGGGGCCAG TCGGTCGTGG TCGGGACGGT GGTCCTGTTC
GGCTTCCTCA TCTTGGCGTT GGGCATCTAT CAGGTACAGG TCGTCCCCAC CGAGAACGCG
GATGTCGAGT TCGAACACAG TCAGGAGGTC GAAGACCACT TCGGAGATCT CCGAAACGGT
GTTCTCGACG CCGCTGCCAC GGCTTCGACG CGGTCGACGC AGATCCGGTT GGGAACGCGG
TATCCTTCTC GGACGTTCTT CGTGAATCCC CCGCCCGTCT CCGGCTCGCT CACGACTCAG
GAGACCGGTG AGCTCCGTGT GCGGAACGCG ACGATTGGGG GCGATGCCAC TCACGAGAAC
GTCGGTCTAT TCTGGAACAC GACCCCGACA TTCGAGACGC GATCACTCCA GTATGATGCC
GGTTACAACG AGTTCCGCGA TGCCCCGCGT CTCACCTACG AGCACTCGGT GGTCGCTGCC
GAGTTCGACG ACGCGCTCCT CCTCCGATCG GGGCAGACCG TCTTGTCGGA AGACGGGAGC
GTTTCACTGA CCGCGCTTAC CGGAACAGTC TCTGAGAACA GCGTCGAACG CCGGAGCGTC
GATGTCCGGG CCGTCTCGGC GAGCGACACT ACCGTCCCGA TCGTCCCCAA TAACGGATCG
ATCACGCTTG AACTCCCGAC GGCAGTTGAG GATCCCGCCA CGCTCGCGAC CCGGTGGACG
GAACGACTCC CGGCGGGCGC GACCGCCGCC GCCGACGAAG CCAACGGGAC GGTGCGGATC
ACGCTGGCCA ACGGCTCTGA CCCGTCGAAC CCGTACCGCC TAGGGCTTTC TGAGATATCG
CTCGACACCA CCGGAACGAC CGAACCGGCA TACATTGTTC CTGTTGACTC CGAAAGTGCC
GTGCTCGGCG AGCAGGTTCT CGTTGAGGTC CGAGACCGGT ACAACAACCC GGTTCCAGAC
GCGACAGTCT CGTTCGACGG TGTGAACCGG ACGACTGACG ATGACGGACA AGCCGCTTTT
GAGCCGACAG GGACGGGGTC GCTCACCGCC ACAATCAACG GGACCGTGGG GCCGGCCTAC
GAGTCGGTCG TCTTCGACGT GTCCGAAAGT GGCGGCGGAG CCCCCACAAA CCGGACGTTC
GATGTCGAAT GGGACGAGTC AGATCCAGCC ACCATCGAGG AAGGGACGAG CGAATCGCTT
GACATTCTCG TCTCGGACAG CACATCAGGC GAACGAATCG ACGGTGCCGC GGTCGATGTC
TCCTTCGCGC CGCGAGGCAC CGTTAACGGG CCGCCAAGCA TCTCGAATCC GCCGGTGACC
GATTCGGACG GTCGGACGAC GGTTTCGTTC GGTACCAACG ATGCTCAGGC AGGCGACTCG
TTTGACTTGT ACGCGTCTTC CGGTGACGAC GTGGACCGGA TTGTCGTCGA CATTGTTCCC
TTGATGACCA TATACGACGT TGTGAGTGTC GATCTACAGT CCGCGGGAGG TAACGACATC
GATGTCACAT TCGAAATCGA CACCAACGAC CCCGACGCGC AGGTGAACGT TCAGTCGATC
CGGAGCAACG GGGACATGCG GGATGAGACC GGACTCATCG ATGCCTCCGA TGGCCAACAA
ACCGTAACCA TCGGGGGCGG TAACCAGGCC GTCGAGGTCC GCGTCATCCT CTACGACGGA
GCGGGGGTCG AGCAGGACCG GCAGACGGTT CCATATCCCT AA
|
|---|
| Protein sequence | MRFSRDRRGQ SVVVGTVVLF GFLILALGIY QVQVVPTENA DVEFEHSQEV EDHFGDLRNG
VLDAAATAST RSTQIRLGTR YPSRTFFVNP PPVSGSLTTQ ETGELRVRNA TIGGDATHEN
VGLFWNTTPT FETRSLQYDA GYNEFRDAPR LTYEHSVVAA EFDDALLLRS GQTVLSEDGS
VSLTALTGTV SENSVERRSV DVRAVSASDT TVPIVPNNGS ITLELPTAVE DPATLATRWT
ERLPAGATAA ADEANGTVRI TLANGSDPSN PYRLGLSEIS LDTTGTTEPA YIVPVDSESA
VLGEQVLVEV RDRYNNPVPD ATVSFDGVNR TTDDDGQAAF EPTGTGSLTA TINGTVGPAY
ESVVFDVSES GGGAPTNRTF DVEWDESDPA TIEEGTSESL DILVSDSTSG ERIDGAAVDV
SFAPRGTVNG PPSISNPPVT DSDGRTTVSF GTNDAQAGDS FDLYASSGDD VDRIVVDIVP
LMTIYDVVSV DLQSAGGNDI DVTFEIDTND PDAQVNVQSI RSNGDMRDET GLIDASDGQQ
TVTIGGGNQA VEVRVILYDG AGVEQDRQTV PYP
|
|---|
| |