Gene Hlac_2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2312 
Symbol 
ID7401929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2305645 
End bp2306100 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content69% 
IMG OID643709385 
Product30S ribosomal protein S19e 
Protein accessionYP_002566958 
Protein GI222480721 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2238] Ribosomal protein S19E (S16A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.985969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACCA TCTACGACGT GCCGGCCGAC GCCCTCATCG AGGAAGTCGC CGCACGACTC 
GAAGACCGGA TCGACGAGCC CGACTGGGTC GAATTCGCCA AGAGCGGCGC CGGCAAGGAG
CTCCCGCCGG AACAGGAGGA CTTCTGGTAC GTGCGCTCCG CCAGTCTCCT CCGAAAGGTC
GCCCAGAACG AGCCGATCGG CATCGAGCGG CTCGCGACCG AGTACGGCTC GAAGAAGCGC
GGTTCGAACC GCTACTCCGT CCGCCCCGGC GAGCACGAGG GCGGCTCCCG CAAGCTCATC
CGCGCGTCGC TGCAGGCCCT CGAAGAGGAC GGGCTCGTGA CGACCGCCGC CGGCGAGGGT
CGCCGGATTT CCGACGACGG CGAGGCCTTC CTCTCCGAGG TCGCCGCCGA CGTCTTCGAG
GACCTCGACC GGCCGGAACT CGAACGCTAC GCGTAG
 
Protein sequence
MVTIYDVPAD ALIEEVAARL EDRIDEPDWV EFAKSGAGKE LPPEQEDFWY VRSASLLRKV 
AQNEPIGIER LATEYGSKKR GSNRYSVRPG EHEGGSRKLI RASLQALEED GLVTTAAGEG
RRISDDGEAF LSEVAADVFE DLDRPELERY A