Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2305 |
Symbol | |
ID | 7401922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2297584 |
End bp | 2297925 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643709378 |
Product | thioredoxin |
Protein accession | YP_002566951 |
Protein GI | 222480714 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0025384 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.350799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCAA CTGATGCCGT CCCCACGGAA CCGATTCAGC TGGCCGACCC CGACGAGTTC GACGACTACG TCGCCGACCA CGACGTGGTC CTCGTCGACT TCTACGCGGA CTGGTGCGGT CCGTGTCAGA TGATGGAGCC GGCCGTCGAG GCGATCGCGA ACGACACCGA CGCGGCCGTC CTGAAGGTCG ACGTCGACCA GCACCAGGCG CTCGCCGGCG AGTATGGCGT GCAGGGTATC CCGACGCTGC TCGTGTTCGT CGACGGCGAG CTCGCGGAGC GGATGGTCGG CGCGCAGACG GAGGCGGCGC TTACCGACGC GGTCGCAGAG CACACCGCCT GA
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Protein sequence | MSSTDAVPTE PIQLADPDEF DDYVADHDVV LVDFYADWCG PCQMMEPAVE AIANDTDAAV LKVDVDQHQA LAGEYGVQGI PTLLVFVDGE LAERMVGAQT EAALTDAVAE HTA
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