Gene Hlac_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2305 
Symbol 
ID7401922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2297584 
End bp2297925 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content68% 
IMG OID643709378 
Productthioredoxin 
Protein accessionYP_002566951 
Protein GI222480714 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0025384 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.350799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAA CTGATGCCGT CCCCACGGAA CCGATTCAGC TGGCCGACCC CGACGAGTTC 
GACGACTACG TCGCCGACCA CGACGTGGTC CTCGTCGACT TCTACGCGGA CTGGTGCGGT
CCGTGTCAGA TGATGGAGCC GGCCGTCGAG GCGATCGCGA ACGACACCGA CGCGGCCGTC
CTGAAGGTCG ACGTCGACCA GCACCAGGCG CTCGCCGGCG AGTATGGCGT GCAGGGTATC
CCGACGCTGC TCGTGTTCGT CGACGGCGAG CTCGCGGAGC GGATGGTCGG CGCGCAGACG
GAGGCGGCGC TTACCGACGC GGTCGCAGAG CACACCGCCT GA
 
Protein sequence
MSSTDAVPTE PIQLADPDEF DDYVADHDVV LVDFYADWCG PCQMMEPAVE AIANDTDAAV 
LKVDVDQHQA LAGEYGVQGI PTLLVFVDGE LAERMVGAQT EAALTDAVAE HTA