Gene Hlac_2295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2295 
Symbol 
ID7400005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2285274 
End bp2286434 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content58% 
IMG OID643709368 
Productsodium/hydrogen exchanger 
Protein accessionYP_002566941 
Protein GI222480704 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.784703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATA TACTGCTAGT GGTCGGCGTG ACGTTGCTGG TCGCGTTTGT CTTCGGTGAG 
GCCCTCGAAC GGGTTGGTGA ACCTGCTCTC GTCGGTGAGA TCATCGCAGG ACTGGTTCTC
GGGCCGTCCA TCATTGGTCT CATTGACTAC GATGAGACAT TCGCTGTGTT CGGGATCATC
GGCGCAATGC TCCTCTTTTT CGATATCGGC TACGAGCATC TCGACCTTAC AGAACTCCTG
TCAGTCGGTT CTGCCGCCGT CAGTATCGCG CTGTTTGGGA TGATAATACC CGCGGGCACC
GGTCTCGCAC TCGGCCTCGC GTTCGACTAC AGCGTCACCG AGAGTGCTTT CCTGGCACTC
GCGCTCTCGG TGACTTCTAT CGCCGTAACC GCTCGAACGT TACTTGACCT ACACCAGCTC
GATTCGCGTG TCGGGCATCG TGTTGTCGGG GCCGCAGTCG TGGACGACAT CGTCGGTCTC
GTCGCGTTCG CACTGCTCTT GCTCGCAGTC TCCGGGGGCG GTACCATCGA GGCCGTGACG
ACTCTCGGAC AAGTGATCGG GTTCTTTGCC CTCGCCGTGA TCGCTCGGTT CGCCGTTATC
CAACAACTGT CGTCACTTCT GGCGCGTTCA CGGCAGATAG AAGCAGATAT ACTGGCCCTC
TTTGGTGTGG TATTCCTCGT TAGTTTCAGT GCTGAGGCGG TCGGTCTCGA TGTTACCCTC
GGGGCACTCA TGATCGGTCT GCTTGTGGGT GAAGATGAGC GTCTCTCGCG GTTGGAAGTC
CGTGAGGGTA TCGCCGGTAT CGCGTACGGG ATGTTTATTC CACTTTTTTT CGCAGGCGTG
GGAGCGCAGA TCGATCTTCG TGTCCTGACC ACGCTTGACA CATTCGTCAT CGCCGTCGTT
ACTTTCGGTC TAGCGGCGAA GTTTGTCGGC GGGTTTATCG GCAACCTGAT AGCGGGCGGA
GATGTCCACG AGTCCGCCGC GATCGGCGTC GGTATGACTC CAAAGGCGGG AGTCGAACTG
GCGATCATCA GTGCCGCTCT CGCAGAAGGA CTCATCTCAA TACGGCTGTT CTCGGCCATT
GCAGCGCTCG TACTGGTGTC TGTGTTGATC TCTCCATCTC TTCTTCAAGC TGTGTTGAAC
CGGACGAACA GTCCCGAGTG A
 
Protein sequence
MADILLVVGV TLLVAFVFGE ALERVGEPAL VGEIIAGLVL GPSIIGLIDY DETFAVFGII 
GAMLLFFDIG YEHLDLTELL SVGSAAVSIA LFGMIIPAGT GLALGLAFDY SVTESAFLAL
ALSVTSIAVT ARTLLDLHQL DSRVGHRVVG AAVVDDIVGL VAFALLLLAV SGGGTIEAVT
TLGQVIGFFA LAVIARFAVI QQLSSLLARS RQIEADILAL FGVVFLVSFS AEAVGLDVTL
GALMIGLLVG EDERLSRLEV REGIAGIAYG MFIPLFFAGV GAQIDLRVLT TLDTFVIAVV
TFGLAAKFVG GFIGNLIAGG DVHESAAIGV GMTPKAGVEL AIISAALAEG LISIRLFSAI
AALVLVSVLI SPSLLQAVLN RTNSPE