Gene Hlac_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2288 
Symbol 
ID7399998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2278183 
End bp2278908 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content66% 
IMG OID643709361 
ProductAbortive infection protein 
Protein accessionYP_002566934 
Protein GI222480697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.295028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG ACCTCCCGGT CCCGGTTGAT CGACTGACCC ACGCCGCGAG CGCCGTCTTC 
GCACTCATTT TCGCGCTCGT CGTCGCTAGC CTCATCTCCC AACTGGCCAC CTCAGCCGCG
GTCGGCGTCG GCGTCGTCGC GCCCGACACG AACGCGTTCA CGATCGTCCG GACCGTCGCC
AATTTCGTGG GATTCCTCCC AGCCGTGGTC GGCTACCTCC TGATCACCGA CCAGCGGGAT
CTCGTTTCGG TCTCTCTCCC GTCGCTCCGA GAAGTCGGAC TCATCGTGGG TTCCGCGATC
GTCCTCTACG GGCTCCAGAT CGGGATCCTC CTCACGCTCC GCGAGTTCGG ATTCCGGACC
GGAGAGAATC CGGCGACGAT CGCCGCCGGC GACCCGGTGG TTTACTACGC CGCGATGATC
GTCGTCTCGC TTTTGATCGT GGGGCCCGCA GAGGAGCTGC TGCTTCGCGG CGTCGTCCAG
GGTGGACTGC GGCGCTCATT CGACGCCGCG CCGGCGATCC TCATCGCGGC CCTCATATTC
GGAGCGCTCC ACGGGAACGT CGAGGGCACC GCCGTCGAAC AGGTCACGTA CATGGGCGTG
ACGGTGGTCC TCGGTGCGAT CCTCGGCGTC CTCTACGAGC GGACGGAGAA CGTGCTGGTC
CCGGGGTTCG CACACGGGCT GTACAACGCG ATCATCTTCG CGGGGTACCT CTGGCGCGTG
CTGTGA
 
Protein sequence
MTDDLPVPVD RLTHAASAVF ALIFALVVAS LISQLATSAA VGVGVVAPDT NAFTIVRTVA 
NFVGFLPAVV GYLLITDQRD LVSVSLPSLR EVGLIVGSAI VLYGLQIGIL LTLREFGFRT
GENPATIAAG DPVVYYAAMI VVSLLIVGPA EELLLRGVVQ GGLRRSFDAA PAILIAALIF
GALHGNVEGT AVEQVTYMGV TVVLGAILGV LYERTENVLV PGFAHGLYNA IIFAGYLWRV
L