| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2287 |
|---|
| Symbol | |
|---|
| ID | 7399997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2276811 |
|---|
| End bp | 2278103 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643709360 |
|---|
| Product | phosphoglucose isomerase (PGI) |
|---|
| Protein accession | YP_002566933 |
|---|
| Protein GI | 222480696 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.747954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.107065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTCG ACCTCGGCAA CGTCCTAGAC ACGACACCGG GACTCACGGA GGAGACCTTG
GACCGACTCG ATTCGCGGGT CGCGGACGCA CACGACCGGA TCGCCACCGG CATGGCCGAC
GACGAGTTCG GCTACGCCGC GCTGAACCTC CCGGAGACAG CCGACCCGGA CGCGATCCGC
GCCGCGACCG ATCAGTTCGA CCGCCTCGAA GCGGTCCTGA CCGTCGGGAT CGGCGGGAGC
GCGCTCGGCG CGGCGACGCT CGCGAACGCC CTCGAAAGCG ACGTGGACGC GTACTTCCTC
GACAACGTCG ATCCCGACGC GGTGGCGTCG CTGCTCGATC GCCTTCCCCT CGATGAGACC
GTCGTCAACG TCGTCTCGAA GTCCGGGACG ACCGCGGAGA CGCTCGCGAA CTTCCTCGTC
GTCCGCGAGG CGATGGCGGA GGCGGGCGTC GACTGGACCG ACCGCACTCT CGTGACGACC
GGCGAGGAAG GGAACCTCCG CGCGCTCGCC GACGCCCACG ACCTCCCCGT GCTTGACGTG
CCCGACGGGG TTCCGGGTCG CTTCTCGGCG CTCTCGACGG TCGGGCTCGC GGTGCCGGCC
CTGCAGGGCC ACGATATCGA GGCCATTCTC GCGGGCGGAC GCGACGGGAT GGAGAGCCTG
TCGGGGTCGC TGTTCGAGAC GCCCGCCTAC GCCTACGGCA CGGCGACGTA CGCGCTCGCC
GAGCGCGGCG CGCTCACCAA CGCCGTGATG CCGTACGCGG AGTCACTGGA GACGTTCGCC
GAGTGGTTCG CCCAGCTGTG GGCCGAGAGC CTCGGCAAGG ACGGGCTCGG CCAGACTCCC
GCCCGCGCGC TCGGCGCGAC CGACCAGCAC TCTCAGCTCC AGCTGTACCG CGCCGGCCCG
CCGGACAAGC TCGTGTCGCT GATCCGGCCG ACCGAGCGCG CCGAGACCGA GATTCCGGAG
ACCGATCTCG ACGGGCTGGC GTACCTCGGC GGCTCGTCGC TCGGCGACCT GCTCGACGCC
GAGTTCGAGG CGACCGAGGC GAGCCTCGCG GCCGCCGACG TGCCGAACCT CCGCGTCGAG
ATCGACCGCG TCGACGAGCG GGGGCTCGGC GAACTCCTGT ACGCGATGGA GGCCGCCTGC
GTGCTGTACG GCGAACTCGC GAGCGTCTCG ACGTTCACGC AGCCCGCGGT CGAGTGGGGG
AAGAAGGCGG CTCGGGGACT GCTCGGCGGC GGCGATTTCC CGGAGGCCGA CGCCGTGGCC
GACAAGCGCG AACTGCGGAT CGACGGCTCC TGA
|
|---|
| Protein sequence | MHVDLGNVLD TTPGLTEETL DRLDSRVADA HDRIATGMAD DEFGYAALNL PETADPDAIR
AATDQFDRLE AVLTVGIGGS ALGAATLANA LESDVDAYFL DNVDPDAVAS LLDRLPLDET
VVNVVSKSGT TAETLANFLV VREAMAEAGV DWTDRTLVTT GEEGNLRALA DAHDLPVLDV
PDGVPGRFSA LSTVGLAVPA LQGHDIEAIL AGGRDGMESL SGSLFETPAY AYGTATYALA
ERGALTNAVM PYAESLETFA EWFAQLWAES LGKDGLGQTP ARALGATDQH SQLQLYRAGP
PDKLVSLIRP TERAETEIPE TDLDGLAYLG GSSLGDLLDA EFEATEASLA AADVPNLRVE
IDRVDERGLG ELLYAMEAAC VLYGELASVS TFTQPAVEWG KKAARGLLGG GDFPEADAVA
DKRELRIDGS
|
|---|
| |