Gene Hlac_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2280 
Symbol 
ID7399990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2267753 
End bp2268718 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content70% 
IMG OID643709353 
Producthypothetical protein 
Protein accessionYP_002566926 
Protein GI222480689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.17764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.128363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA GACAGGGGGC GGCGGGGATC TTTCGGATCC AGAGCGCGGA GCCCGCGACG 
GAATGTACCA GCGTCTCGTG TGACCTCGCC TCGATCGCGA GCGAACCCGG CACCGTCACC
GCGCTGGTCA TCGCCGGCGT CGTCGCGTTC GTCGCGCTGG CGTACATCCG CGACGCCGAG
GCCGACTGCC GCAACGAACG CCGGCGGGTC CTCGACGAGC GCGACGCCTT CGAGGAGTTC
GCTGACCGCG TCTCTGGACT CGATCCCGCG CCCGTCTCGT CGACCGCGTC GTCGCTCGAC
GGGTCGGCGG CCACGGTTCG CATCGTCTCT ACGGCTAACG GAGCGAACGG GGTCGGCAAC
GATGTCCGGC TCCGGCGCGT GCTCGTGGCG TACCGGGACA CGGTGATGTC GTTGCCTCAC
TACAGGGAGG AGTACGACGA GACGATCCCC GAGAGTCTTG CGGCCGAGCT GGGCCCGGAT
ACGGCCACCG CGCTGGCCTC CAACGGCACC CTCTCGACCG GGGCACAGTC GGCCCTGGTG
CGGCGCAGCC GGCGGGCAGC CGACGCCCGG TCGTCGCTGG CGGATGCGAT CGGCGCGGAG
ATCGATGCGC TGTCCCGGTT CGAGGCTGAT CTGACCCGCG TCGACCGACG ACGCCGCCGT
CTCATCGAAC ACCTTGACGG CGTGGCGGGT GATCGGACGG GTGCCGCGAT CGACGTCTGG
CGGCAGCTGG ACGGGCTCGA AGACGACTGC AACGATATCG CCGGCGAGCG CCAACGCACG
CTCGACGACC CGCCGATGAC CGTCGATGCA CCCAACGCCG ACGAAGGACG GCGGACATTC
CACGAGTACC TGTACGGATC CGACTCCGGA CACCCCCACC CCGTGTTGGC GCAGGTCGCA
GAGATCGCCG GGCGGATCCG GACGGACCGC GACCGGGTTG CGACCCAGAT CGCCGGCGGC
GAGTGA
 
Protein sequence
MSTRQGAAGI FRIQSAEPAT ECTSVSCDLA SIASEPGTVT ALVIAGVVAF VALAYIRDAE 
ADCRNERRRV LDERDAFEEF ADRVSGLDPA PVSSTASSLD GSAATVRIVS TANGANGVGN
DVRLRRVLVA YRDTVMSLPH YREEYDETIP ESLAAELGPD TATALASNGT LSTGAQSALV
RRSRRAADAR SSLADAIGAE IDALSRFEAD LTRVDRRRRR LIEHLDGVAG DRTGAAIDVW
RQLDGLEDDC NDIAGERQRT LDDPPMTVDA PNADEGRRTF HEYLYGSDSG HPHPVLAQVA
EIAGRIRTDR DRVATQIAGG E