Gene Hlac_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2279 
Symbol 
ID7399989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2266675 
End bp2267613 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID643709352 
Productinitiation factor 2B related 
Protein accessionYP_002566925 
Protein GI222480688 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.14439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.124168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACG GTAGTCAGTC GGTCGATCTG ATTCACGCTC TCTCCGTCCG ACAAGACCCC 
GGAACCCCTT TGAATTGGGA CGACGACTCT TCGAGTATGA TTGACGAGAC CGTCGCCGAG
ATCCGGGCGA TGCGGACCCA CAGCACGTCG GCGGTGGCCG TGAAGGCGAC GCGGTCGCTC
GCGGACCTGC TCGACCGCGA GTACGTGACT GTCGACGAGT TCGAGCGCGA CCTCGAACAC
AACGCCGGTG TGTTGCGGCG GTCGAACCCC TCCCACGCCG CGCTCCACAA CGCGATGCGC
GAGGTCGAGC GCTCGATCGT CGGCGAGGCG ACGAGCGTCG AGGACGGCAA ACAGCGACTC
GAAGACACTA TCGACCGCGT CGTCGACGAC ATCGAGACGG CGAAAGGGGA GGCCGCCGCC
AACGCGACCG AGCGCATCGA GGACGGCGAC ACCCTGCTGG TCCACGACTA TTCGACGACG
GTGCTTGAGG CGATCGAGAA CGCGGCCCGC GACGGCGCCC ACCTGACGGT GTACGTCACG
GAGGCGCGCC CGCGCACCCT CGGTCGGAAG ACGGCCCGCG TGCTCGCCGG CATCGCACGG
GTCGACACCC GGATGGTGGT CGATAGCGCG ATGGGGTACG CCCTCCGCGA CTGCGACCAG
GTCCTCCTCG GGATCACGTG TATGACCGGG GGCACGTACT ACAACCGCAT CGGAACGTTC
CCGCTTGTCG TCACCGCCCG CGAACTCGGC GTCCCGGTGA CCGCCGTCGG CTCCGACGCG
AAGCGGATCG AGGAGTTCCG GTTCGAAAAC GAGTTCCGCG ACGCTGTCGA GGTGATGCGC
GAGCCCGTCG AGGACGTGAC GATCGAGAAC CCAAGCTACG ACGCGACCCC GATCGGCATG
CTCGACACCA TAATCACCGA CGACGGCATC GTCGAGTAG
 
Protein sequence
MYDGSQSVDL IHALSVRQDP GTPLNWDDDS SSMIDETVAE IRAMRTHSTS AVAVKATRSL 
ADLLDREYVT VDEFERDLEH NAGVLRRSNP SHAALHNAMR EVERSIVGEA TSVEDGKQRL
EDTIDRVVDD IETAKGEAAA NATERIEDGD TLLVHDYSTT VLEAIENAAR DGAHLTVYVT
EARPRTLGRK TARVLAGIAR VDTRMVVDSA MGYALRDCDQ VLLGITCMTG GTYYNRIGTF
PLVVTARELG VPVTAVGSDA KRIEEFRFEN EFRDAVEVMR EPVEDVTIEN PSYDATPIGM
LDTIITDDGI VE