Gene Hlac_2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2278 
Symbol 
ID7399988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2265943 
End bp2266299 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content63% 
IMG OID643709351 
ProductRNA polymerase Rpb4 
Protein accessionYP_002566924 
Protein GI222480687 
COG category[S] Function unknown 
COG ID[COG1460] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.452982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.153083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAT TCAAAGAGAA AATCGACGAG GAGTACGTCA CCACCTCCGA GGCGAAGGAG 
ATCCTCGTGG AGATCGAAGC GGAGCGCGCG GACGACGAGG ACCGCGACCT CCGCTACGAG
CTCGCCCGCG CGATCGAGCA CGTCAACCGG TTCGCCCACC TCGACGCCGA GGAATCCCGG
GAACTGGTCG AGGAGCTGAC CGAGATTGAG CAGATCGACC TGCCGACCGC GGTGAAAATC
GCGGACCTCC TCCCCGAGGA CCGCACCGAG CTCCGGTCAG TGTTCGCGCA GGAGCGCTAC
TCGCTGGACG GCGACGAACT CGACGACGTG CTCAACGTCG TTGCGAAGTA CGCCTAA
 
Protein sequence
MTIFKEKIDE EYVTTSEAKE ILVEIEAERA DDEDRDLRYE LARAIEHVNR FAHLDAEESR 
ELVEELTEIE QIDLPTAVKI ADLLPEDRTE LRSVFAQERY SLDGDELDDV LNVVAKYA