Gene Hlac_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2272 
Symbol 
ID7399982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2260104 
End bp2261207 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content74% 
IMG OID643709345 
ProductAsparaginase/glutaminase 
Protein accessionYP_002566918 
Protein GI222480681 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.120456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA CGGAGCCGAC CACGGACCGC GAGGCACCCG ACGGGAGACG GACCGCGATC 
GCCGGCGGAG CGAATCCTCG CGTTACCGTC GTCGCCTGCG GCGGCACCAT CGCGTCCGAG
CCGGACGACG GTGGCGCGGC GCCGGCAAAG ACCGGCGACG ACCTCGTCGC GGCAGTGCCG
GGCATCGAGC GGTACGCGGC CGTGAGCGCT CGCGAGGTCT GCTCGCAGCC CGGGTTCGAC
GTGCGGTGGC GCGACGTGCT CGCGACCGCG ACCGCGGCGC GAGAGGCGGT CGCGGACGGC
GCCGACGGTG TCGTCGTCAC TCACGGGACC GACACCCTCG CCGATACCGC GTTCGCGCTC
GACCTGCTCA CCGACCTTCC CGCACCGGTG GTCGTCACGG GGGCCCAGCG CCGACTCGAC
GAGCCCTCCA GCGACGTGCC CGCGAACCTG ACGCTCGCGG TCCGGGCCGC CGCAGACGAT
CGATTCGCGC CGGGGGTCCA CGTCGCGTTC GACGACGAGA TCCACGCCGC CCGCGACGTG
GTCAAGGGCC ACAGCAACGC GCTCTCGACG ATGACCTCGC CCGGGACAGG GCCGGTGGCG
ACGGTCACCC GCGCCGGGTC GAGGCTCGTC CGCGAGCCGC GGCGCGGAGT CGACATCGAC
CCGCTCGTCG ATGGCATCGA GAGCGCCGAT GTCGTCCCCG AGGTGCCCGT GATCCACTCG
GGGACGGGGG TCAGTGCGGG CGCGGTCGAG CGCGCGGTCG ACGCGGGCGT CTGCGGGCTC
GTGATCGAGG GAACCGGCCT CGGCAACGCG ACCGCCGCGA TCGGCGACGC CGTGGCTGAC
GTCCTCCCGG AGGTCCCCGT GGTCGTCGCC GGTCGTCCTC CAGCGGGTCC CACCGAACCG
GTGTACGGGA CGCCCGGCGG CGCGGTCACG CTGGCGGAGC ACGGTGTGAC GTTCGCCGGC
CCCCTCCCGG CGTCGAAGGC GCGGATCGCG CTCGCACTCG GACTCGCGGC CGACCTCGAC
CGCGACGGGG AAGCGGGCGA CACCGATGCC GACGCCCTCG CCGACCTGTT CCGGACGCCG
CAAGGGAAAA ATCGACCGGC GTAA
 
Protein sequence
MTDTEPTTDR EAPDGRRTAI AGGANPRVTV VACGGTIASE PDDGGAAPAK TGDDLVAAVP 
GIERYAAVSA REVCSQPGFD VRWRDVLATA TAAREAVADG ADGVVVTHGT DTLADTAFAL
DLLTDLPAPV VVTGAQRRLD EPSSDVPANL TLAVRAAADD RFAPGVHVAF DDEIHAARDV
VKGHSNALST MTSPGTGPVA TVTRAGSRLV REPRRGVDID PLVDGIESAD VVPEVPVIHS
GTGVSAGAVE RAVDAGVCGL VIEGTGLGNA TAAIGDAVAD VLPEVPVVVA GRPPAGPTEP
VYGTPGGAVT LAEHGVTFAG PLPASKARIA LALGLAADLD RDGEAGDTDA DALADLFRTP
QGKNRPA