| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2265 |
|---|
| Symbol | |
|---|
| ID | 7399975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2252949 |
|---|
| End bp | 2254157 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643709338 |
|---|
| Product | HEAT domain containing protein |
|---|
| Protein accession | YP_002566911 |
|---|
| Protein GI | 222480674 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0591737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTGT ACCAGCACGC GCGAGATGGG AACGCCGAGC GGCTCAGAGA CGCCATGGGC
AGCGACAGCG CCGCGGTCCG GAAGCGTGCG GCCGAGTTCC TCGGCGAGGT CGCCGACCAC
GGCGACCAGC CGTCTATCGA CGTACTCCTG CGCGCCGCGA CCGGGGACGA GGACGCACAG
GTCCGCGGGG GCGCTGTCGA TGCGCTCGAC GAGATCGGTG AGGCGGCGCT CGAACAGCTC
CTCTCGGAGC TCACCGGCAC CAAAGGGTCC GAGGCGGAGT GGGTCACCGC CCGGAAGTTC
GCCCGCGCGC TGCAGGCCGA CCGCCCGGAG CTACGGATGG CCGCCGCCAA CGCGCTCGGC
CGACTCGACG ACGGGAGCGG TCTCCAGCAC CTCGTCGAGG CGCTCGACGA CGAGGACGCC
CGCGTCAGGC TCCGGGCGTG TCAGGCCTGC GGGACCTTCG CCGATCCGCG TGCAATCCCC
GGGCTGACCG AGCGGCTCGA CGACGAGCCG CGAGTCCGGC GGGCCGCCGC CAACGCCCTC
GGAAACATCG GTACCGATCG GGCGCTTTCT CCCCTCCTGG ACCTGCTCGA CGACGCCGAC
GAGTCACTCC GGCGCATCGC CGCCGGCGCG CTCGGGAAGG CGAACAACCC CGAGCCGGTC
GAGCCGCTGG CGCGCGCGCT CGGCGACGAG AGCGCGGTAG TGCGCAACGC CGCGGTGTAC
TCGATCATCG AGCTGCTCTC GAACGTACCG ACTCAGCAGA GCCACGCGGT CCGCGATCGA
GTCGTCTCCG AGCTGAAGCA GGCCGACGAC GAGACGGTCG TCGAGCCGCT GGTAGAGATC
CTCACAGACG GCCAACAGAG CCGCCAGCGA CGGAACGCGG CGTGGATCCT CGGCCGCGTC
GCAGAACGGG AGTCGACGGT CGCAGTCGAG GCGCTCGCGG ACGCGCTCGC GGACGACGAC
GCGCAGACCG CGCAGTTCGC GGCCACCAGC CTCAAGAGCC TCGGCGGGCC GATCGTCGAG
GACCGCCTCC TCGACCGGCT CGGAACCGAA CACCCCGAGG ACGCCCGGGC GAAGGCGGTG
TTCGTGCTCG GTCAGGTGGG TGGACAGGAG ACGCTCAACC GGCTCGAAGA GTTCACTGAC
GACGAGAGCC CTGCGGTCCG GAAGCGGGTG TTCTCGGCAG TCTCGAAGCT CCGGGCCGGG
GGTCCGTAA
|
|---|
| Protein sequence | MSLYQHARDG NAERLRDAMG SDSAAVRKRA AEFLGEVADH GDQPSIDVLL RAATGDEDAQ
VRGGAVDALD EIGEAALEQL LSELTGTKGS EAEWVTARKF ARALQADRPE LRMAAANALG
RLDDGSGLQH LVEALDDEDA RVRLRACQAC GTFADPRAIP GLTERLDDEP RVRRAAANAL
GNIGTDRALS PLLDLLDDAD ESLRRIAAGA LGKANNPEPV EPLARALGDE SAVVRNAAVY
SIIELLSNVP TQQSHAVRDR VVSELKQADD ETVVEPLVEI LTDGQQSRQR RNAAWILGRV
AERESTVAVE ALADALADDD AQTAQFAATS LKSLGGPIVE DRLLDRLGTE HPEDARAKAV
FVLGQVGGQE TLNRLEEFTD DESPAVRKRV FSAVSKLRAG GP
|
|---|
| |