Gene Hlac_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2262 
Symbol 
ID7399972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2248779 
End bp2249918 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content70% 
IMG OID643709335 
Productresponse regulator receiver modulated CheB methylesterase 
Protein accessionYP_002566908 
Protein GI222480671 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00869886 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGATTC TGGGCCCGCT TCCGCACATG AGTAGGACGA CGGATCGGCG AGGCGGTCGC 
GACGACTCCT TGCGGGTAGT TGTCGTCGAC GACTCGCCGT TCATGCGAGG GTTGATCTCC
GATCTCTTGA CCGACGCGGG GGTCGCGGTC GTCGGCGAGG CGGGCGACGG CGCCGAGGCG
CTGTCGGTGG TCGCCGAGAC GCGTCCGGAT GTTGTGACGA TGGACGTCGA GATGCCGGGG
ATGGGCGGGC TCGAAGCCGT GGAACGGCTG ATGGACGAGA CGCCGACGCC CGTGCTGATG
CTCTCGGCGC ACACTGCCGA GGGCGCCGAG GTGACGTTTG AGGCGCTCGA ACGCGGCGCG
GTCGACTTCT TCTCGAAGCC CGGCGGCGAG GTGTCGACCG GGGTCTCCCG CGAGTCGGAT
CGGCTCGTCG AGGCCGTCCG GTCGGTCGCG GACGCCGACC TCGACGCGGC GACCCGCGAC
CGACGCGAGC GCGAGGCCGC CGACAGCGAC CAGAATGCGA CGATCTCCAG AGTGTCGACC
ACCTCGACGC CGCCCGCGAC CACTGAGATC GACGGCCCGC TGACGGTCGT GATCGGCGCA
TCGACCGGTG GACCGAACGC GGTCGAGCGC GTCATGTCGG CGCTGCCGAT GGCCGACTGC
CGGGTTGTCA TCGTCCAGCA TATGCCGGAG GCGTTTACCG CGCGGTTCGC CGACCGACTC
GACGAGGCCT CGGCGTACGA CGTGCGCGAG GCGAGCGACG GCGCTCGGAT CGGCTCCGGT
GAGGCGCTCG TCGCCCGCGG CGGAAGCCAC ACCCGGATCG ACAGCTACCG GTCGGGCCGG
CTCCGCGTCA AGCTCGACGA AGACGACTCG CAATCGGTCA CGCCCGCCGC CGACGTGACG
ATGCGCTCTG CGGCCGCAGT CGTCGACGGC CCACTTGTGG GCGTCGTGTT GACCGGAATG
GGTGCCGACG CCTCAGAAGG GATCCGAGCG ATGGCCGACG CCGGCGCGCG GACGATCGCA
CAGAGCGAGG ACACCTGCGT CATTTACGGG ATGCCGAAGC GCGCGGTCGA GACGGGCGGC
ATCGGCGAGA TACACGACCT CGACGACGTG GCCGGCGCGA TCGTGGGGGG TGAGGCCTGA
 
Protein sequence
MLILGPLPHM SRTTDRRGGR DDSLRVVVVD DSPFMRGLIS DLLTDAGVAV VGEAGDGAEA 
LSVVAETRPD VVTMDVEMPG MGGLEAVERL MDETPTPVLM LSAHTAEGAE VTFEALERGA
VDFFSKPGGE VSTGVSRESD RLVEAVRSVA DADLDAATRD RREREAADSD QNATISRVST
TSTPPATTEI DGPLTVVIGA STGGPNAVER VMSALPMADC RVVIVQHMPE AFTARFADRL
DEASAYDVRE ASDGARIGSG EALVARGGSH TRIDSYRSGR LRVKLDEDDS QSVTPAADVT
MRSAAAVVDG PLVGVVLTGM GADASEGIRA MADAGARTIA QSEDTCVIYG MPKRAVETGG
IGEIHDLDDV AGAIVGGEA