Gene Hlac_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2260 
Symbol 
ID7399970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2247400 
End bp2248095 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID643709333 
ProductKaiA binding 
Protein accessionYP_002566906 
Protein GI222480669 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00780772 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGCCT CAAGCGGCGT TCCCGGGTTC GACGCTCTCG TCGACGGCGG CTTCCCGGAG 
AATCGCCTGT ACGTTGTCAG CGGCCCCCCC GGCAGCGGGA AAACGACGTT CTGCTCGCAG
TTCGCCGCGC AGGGCGCCCG CAACGGTGAA GACGTGCTGT ACGTCAGCAT GCACGAGACG
AAGGAGGGGA TCCGTCGCGA CATGGGCGGG TACGACTTCG GGTTCGACCG CGCGCTCGAC
AGCGACCGGA TCACCTTCCT CGACTCCTTC TCCTCGGACG GCCGGCGGTT CTTCGGCTTG
CCGGGCGAAC GGCGGGACCA CTCCGGCGTG ACGAACCGGC TCACCGGCTT CATCAACTCC
CGCGATATCG ACCGGGTCGT CTTCGACTCC ACCATGCTGT TGCGGTTCCT GCTCGACGAC
GACGAGGACA CGATGATCCA GCTGCTCTCC TCCCTGAAGC GGACCGACGC GACCACCCTG
CTCATCTCGG AGATGACCGA CCCGAGCGCC TACTCGGAGG AGCACTACCT CGCGCACGGC
GTCGTCTTCA TGCACAACTA CCTCGAAGAC GGCGGGATGC AGCGCGGGAT CCAGGTGCTG
AAGATGCGCG GAACCGATGT CGACACCGAT ATTCAGGGTA TCGAGTTCAC CGACGGCGGG
CTTCGGGTCG GCTCGGCCGC GACGGTGAGC CACTGA
 
Protein sequence
MRASSGVPGF DALVDGGFPE NRLYVVSGPP GSGKTTFCSQ FAAQGARNGE DVLYVSMHET 
KEGIRRDMGG YDFGFDRALD SDRITFLDSF SSDGRRFFGL PGERRDHSGV TNRLTGFINS
RDIDRVVFDS TMLLRFLLDD DEDTMIQLLS SLKRTDATTL LISEMTDPSA YSEEHYLAHG
VVFMHNYLED GGMQRGIQVL KMRGTDVDTD IQGIEFTDGG LRVGSAATVS H