Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2260 |
Symbol | |
ID | 7399970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2247400 |
End bp | 2248095 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643709333 |
Product | KaiA binding |
Protein accession | YP_002566906 |
Protein GI | 222480669 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00780772 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCGCCT CAAGCGGCGT TCCCGGGTTC GACGCTCTCG TCGACGGCGG CTTCCCGGAG AATCGCCTGT ACGTTGTCAG CGGCCCCCCC GGCAGCGGGA AAACGACGTT CTGCTCGCAG TTCGCCGCGC AGGGCGCCCG CAACGGTGAA GACGTGCTGT ACGTCAGCAT GCACGAGACG AAGGAGGGGA TCCGTCGCGA CATGGGCGGG TACGACTTCG GGTTCGACCG CGCGCTCGAC AGCGACCGGA TCACCTTCCT CGACTCCTTC TCCTCGGACG GCCGGCGGTT CTTCGGCTTG CCGGGCGAAC GGCGGGACCA CTCCGGCGTG ACGAACCGGC TCACCGGCTT CATCAACTCC CGCGATATCG ACCGGGTCGT CTTCGACTCC ACCATGCTGT TGCGGTTCCT GCTCGACGAC GACGAGGACA CGATGATCCA GCTGCTCTCC TCCCTGAAGC GGACCGACGC GACCACCCTG CTCATCTCGG AGATGACCGA CCCGAGCGCC TACTCGGAGG AGCACTACCT CGCGCACGGC GTCGTCTTCA TGCACAACTA CCTCGAAGAC GGCGGGATGC AGCGCGGGAT CCAGGTGCTG AAGATGCGCG GAACCGATGT CGACACCGAT ATTCAGGGTA TCGAGTTCAC CGACGGCGGG CTTCGGGTCG GCTCGGCCGC GACGGTGAGC CACTGA
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Protein sequence | MRASSGVPGF DALVDGGFPE NRLYVVSGPP GSGKTTFCSQ FAAQGARNGE DVLYVSMHET KEGIRRDMGG YDFGFDRALD SDRITFLDSF SSDGRRFFGL PGERRDHSGV TNRLTGFINS RDIDRVVFDS TMLLRFLLDD DEDTMIQLLS SLKRTDATTL LISEMTDPSA YSEEHYLAHG VVFMHNYLED GGMQRGIQVL KMRGTDVDTD IQGIEFTDGG LRVGSAATVS H
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