Gene Hlac_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2256 
Symbol 
ID7399966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2244256 
End bp2245617 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content69% 
IMG OID643709329 
Productphosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 
Protein accessionYP_002566902 
Protein GI222480665 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.361439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00522565 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAGCTGT TCGGATCTAG CGGCATTCGC GGGGTCGCGC TCCGGTATCT CACGCCGGAA 
CTCGTCCTCG GAATCGCGAA GGCCGCCGGC ACGACCTGGG ACGCCGACCG GGTCGCCGTC
GCCCGCGACA CCCGTACCAC CGGCGAGCTG TTCGCCAACG CCGCTGCGAG CGGGCTGGCC
GCGGTCGGCT GCGACGTCGA CCGGCTCGGC GTCGTCCCGA CGCCAGCGGT CGGCAACTAC
TGCGAGTCGG CCGGCATTCC CTGTGTCCTC GTCACGGCCT CGCACAACCC GCCGGAGTTC
AACGGGATCA AGCTCGTCGG CGACGACGGC GTGGAGCTGT CGGTCGACGT GCTCGAACGC
GTCGAACGTC GCGTCCTCGA CGACGAGTAC GACCACGCCG ACTGGCGGAA CGCGGGCGCT
ACAACCCGCG TCGAGTGCGC CGTCGACGAC TACGTCGACC AGCTGCTCGA CGCGGTCGAC
CGCGAGGCGA TCGCCGACGC GAACCTCACG GTCGCGGTCG ACCCCGGCCA CGGCGCGGCG
TCAGTGTCGT CGCCGCGGAT CTACCGAGAG CTCGGCTGTG AGGTGCTGAC CGTGAACGCG
ACACCGGACG GTCACTTCCC CGGCCGGGAT TCGGAGCCGG TCCCGGAGAA CCTCGACGAC
CTTCAACGGC TCGTCGCGAC CACCGACGCC GACGTGGGGA TCGCCCACGA CGGCGACGCG
GACCGAGCGG TGTTCGTCGA CGAGAACGGG GAGTTCGTCG ACGGTGACAC CTCGTTCGCA
GTGATGGCAG ACGCCTGCCT CGAACCCGGT GATGCCGTCG TCAGCGCGGT GAACGTCTCC
CAGCGGCTCG TCGATGTCTG CAACGCCAAC GATGCTGACT TGGAGCTGAC CCCCATCGGA
GCGACGAACA TCATCACGCG AACGCGCGAC CTCCACGACG AGGGGACGAA CGTCCCCATC
GCCGGCGAAG GGAACGGCGG GGTGTTCTTC CCGCCGTATC GGCTCTCGCG CGACGGTGCG
TACATCGGCG CGCGCTTCCT TGAGCTGCTC GCGGCCGCCA GCGACCCGGT CAGCGAGGTG
GTTGCCCCCT ACGCCGACTA CCACTTCGTG CGGCGCAACG TCGAGTACGC GGACGACGAC
GAGCGCGACG AGATGCTGTC AGCCGCGCGA GCTTACGTTG AGACCGCGGA CGCGGAGCCG
AACACCACCG ACGGCTACCG TCTCGACTAC GGGGACGCGT GGGTGCTCGT GCGCCCCTCC
GGCACCGAAC CGAAGATCCG GATCTACGCC GAGTCCGCCG ACGCCGACCG CGCCGAGCGG
CTGGCGACAG ACATGTACGT CGCAGTCGAG AGCGGACGGT AG
 
Protein sequence
MELFGSSGIR GVALRYLTPE LVLGIAKAAG TTWDADRVAV ARDTRTTGEL FANAAASGLA 
AVGCDVDRLG VVPTPAVGNY CESAGIPCVL VTASHNPPEF NGIKLVGDDG VELSVDVLER
VERRVLDDEY DHADWRNAGA TTRVECAVDD YVDQLLDAVD REAIADANLT VAVDPGHGAA
SVSSPRIYRE LGCEVLTVNA TPDGHFPGRD SEPVPENLDD LQRLVATTDA DVGIAHDGDA
DRAVFVDENG EFVDGDTSFA VMADACLEPG DAVVSAVNVS QRLVDVCNAN DADLELTPIG
ATNIITRTRD LHDEGTNVPI AGEGNGGVFF PPYRLSRDGA YIGARFLELL AAASDPVSEV
VAPYADYHFV RRNVEYADDD ERDEMLSAAR AYVETADAEP NTTDGYRLDY GDAWVLVRPS
GTEPKIRIYA ESADADRAER LATDMYVAVE SGR