Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2256 |
Symbol | |
ID | 7399966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2244256 |
End bp | 2245617 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643709329 |
Product | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I |
Protein accession | YP_002566902 |
Protein GI | 222480665 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.361439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00522565 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAGCTGT TCGGATCTAG CGGCATTCGC GGGGTCGCGC TCCGGTATCT CACGCCGGAA CTCGTCCTCG GAATCGCGAA GGCCGCCGGC ACGACCTGGG ACGCCGACCG GGTCGCCGTC GCCCGCGACA CCCGTACCAC CGGCGAGCTG TTCGCCAACG CCGCTGCGAG CGGGCTGGCC GCGGTCGGCT GCGACGTCGA CCGGCTCGGC GTCGTCCCGA CGCCAGCGGT CGGCAACTAC TGCGAGTCGG CCGGCATTCC CTGTGTCCTC GTCACGGCCT CGCACAACCC GCCGGAGTTC AACGGGATCA AGCTCGTCGG CGACGACGGC GTGGAGCTGT CGGTCGACGT GCTCGAACGC GTCGAACGTC GCGTCCTCGA CGACGAGTAC GACCACGCCG ACTGGCGGAA CGCGGGCGCT ACAACCCGCG TCGAGTGCGC CGTCGACGAC TACGTCGACC AGCTGCTCGA CGCGGTCGAC CGCGAGGCGA TCGCCGACGC GAACCTCACG GTCGCGGTCG ACCCCGGCCA CGGCGCGGCG TCAGTGTCGT CGCCGCGGAT CTACCGAGAG CTCGGCTGTG AGGTGCTGAC CGTGAACGCG ACACCGGACG GTCACTTCCC CGGCCGGGAT TCGGAGCCGG TCCCGGAGAA CCTCGACGAC CTTCAACGGC TCGTCGCGAC CACCGACGCC GACGTGGGGA TCGCCCACGA CGGCGACGCG GACCGAGCGG TGTTCGTCGA CGAGAACGGG GAGTTCGTCG ACGGTGACAC CTCGTTCGCA GTGATGGCAG ACGCCTGCCT CGAACCCGGT GATGCCGTCG TCAGCGCGGT GAACGTCTCC CAGCGGCTCG TCGATGTCTG CAACGCCAAC GATGCTGACT TGGAGCTGAC CCCCATCGGA GCGACGAACA TCATCACGCG AACGCGCGAC CTCCACGACG AGGGGACGAA CGTCCCCATC GCCGGCGAAG GGAACGGCGG GGTGTTCTTC CCGCCGTATC GGCTCTCGCG CGACGGTGCG TACATCGGCG CGCGCTTCCT TGAGCTGCTC GCGGCCGCCA GCGACCCGGT CAGCGAGGTG GTTGCCCCCT ACGCCGACTA CCACTTCGTG CGGCGCAACG TCGAGTACGC GGACGACGAC GAGCGCGACG AGATGCTGTC AGCCGCGCGA GCTTACGTTG AGACCGCGGA CGCGGAGCCG AACACCACCG ACGGCTACCG TCTCGACTAC GGGGACGCGT GGGTGCTCGT GCGCCCCTCC GGCACCGAAC CGAAGATCCG GATCTACGCC GAGTCCGCCG ACGCCGACCG CGCCGAGCGG CTGGCGACAG ACATGTACGT CGCAGTCGAG AGCGGACGGT AG
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Protein sequence | MELFGSSGIR GVALRYLTPE LVLGIAKAAG TTWDADRVAV ARDTRTTGEL FANAAASGLA AVGCDVDRLG VVPTPAVGNY CESAGIPCVL VTASHNPPEF NGIKLVGDDG VELSVDVLER VERRVLDDEY DHADWRNAGA TTRVECAVDD YVDQLLDAVD REAIADANLT VAVDPGHGAA SVSSPRIYRE LGCEVLTVNA TPDGHFPGRD SEPVPENLDD LQRLVATTDA DVGIAHDGDA DRAVFVDENG EFVDGDTSFA VMADACLEPG DAVVSAVNVS QRLVDVCNAN DADLELTPIG ATNIITRTRD LHDEGTNVPI AGEGNGGVFF PPYRLSRDGA YIGARFLELL AAASDPVSEV VAPYADYHFV RRNVEYADDD ERDEMLSAAR AYVETADAEP NTTDGYRLDY GDAWVLVRPS GTEPKIRIYA ESADADRAER LATDMYVAVE SGR
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