| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2254 |
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| Symbol | hemD |
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| ID | 7399964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2242871 |
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| End bp | 2243632 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643709327 |
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| Product | uroporphyrinogen-III synthase |
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| Protein accession | YP_002566900 |
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| Protein GI | 222480663 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.093335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.017049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACG GCAACTCCAA TACCCCCCGC GTCGCCGTCT TCCGCCCCGC CGACGAGCGG
ATCGAGGACG CGAAGGCGCT GTTGGCGTCG CTCGGTGCCG ACCCGGTGGC CGACCCGATG
CTCGCGGTCG AGCCAACGGA CGCGACGCCC GAGGATGCGC CGTACGTCGT CCTCACGAGC
AAGACGGGCG TCGAACTCGC CGCCGAGGCG GGCTGGGAGC CCGGCGACGC GACCCTCGTC
GCCATCGGCC CTGCGACCGC CGAGGCGGCG CGGGCGGCGG GCTGGACCGT CGACCTCGTG
CCGGACGAGT ACACCTCCGC CGGGTTGGTG GCGGCGCTGG AGGATCGCGT CGACGGCGAA
CACGTCGAGG TAGCGCGCTC GGACCACGGG AGCGACGTGC TCTTAGCGGG GCTCCGTGAA
GCCGGCGCGA CCGTGACCGA GACGGTGCTG TACCGGCTGA CGCGCCCCTC GGACGCCGGC
GAATCCGCGG CGATGGCCGC CGCGGGCGAC CTCGACGCCG CCGCGTTCAC TTCGTCGCTC
ACGGTGACGC ACTTCCTCGA CGCCGCGGCG GAACGCGGGG TCCGCGAGGC GGCGATCGAA
GGGTTGAACG ACGCCGTCGT GGGCGTAATC GGGCCGCCGA CGGCGGAGAC CGCCGCAGAC
AGTGGGATCG ACGTCGACGT GGTCCCCGAC GACGCCGACT TCGAGGCGCT CGCGCGAGCC
GTCGCCGACG CGGTCGTCGA ACGCTCCTCG GCGAAGCGGT AG
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| Protein sequence | MSDGNSNTPR VAVFRPADER IEDAKALLAS LGADPVADPM LAVEPTDATP EDAPYVVLTS
KTGVELAAEA GWEPGDATLV AIGPATAEAA RAAGWTVDLV PDEYTSAGLV AALEDRVDGE
HVEVARSDHG SDVLLAGLRE AGATVTETVL YRLTRPSDAG ESAAMAAAGD LDAAAFTSSL
TVTHFLDAAA ERGVREAAIE GLNDAVVGVI GPPTAETAAD SGIDVDVVPD DADFEALARA
VADAVVERSS AKR
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