Gene Hlac_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2245 
Symbol 
ID7399955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2235025 
End bp2235618 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content71% 
IMG OID643709319 
ProductMethyltransferase type 11 
Protein accessionYP_002566892 
Protein GI222480655 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.140081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCT TCCGGAACAC GGGACAGCCG GACTGGGACT GGTGGGGACG GGTGTGGCCG 
ACGCCGGGCG CCACCCTCCG CCAGCTCGGG CTCGTGCCTG GGGACCGCGT CGTCGAGATT
GGCAGCGGAA ACGGCTACTT CGCACTGCCC GCGGCGCGGA TTGCCGACCC GGCGACCGTG
TACGCCGTCG ACGTCGATAG GTCGCTGCTC GCCGAACTCG ACGCGCTCGC GACGGAGCAG
GGGATCGACA ACATCACCGC CATCAAGGGG GACGCTCGGG CGCTCTCGGA GCTGCTCCCC
GAGCCCGTGG ATTTCGCGCT GCTCGCGAAC GCGTTTCATG GTATCGAGGA CCGTACCGCG
TTCGTCGAGG CCGTCGCCGC TGCGCTCGCC GTCGACGGCC GGTTCGCCGT GGTGAACTGG
CGCGACCGGC CGCGCGAGGA GACGATGATC GGCGGCGAGC CTAGAGGGCC GCCCACCGAT
CTGCGCCTCT CGCCGGAGGC GACGCGCCGG GCCGTCGAGG AGGCGAGTGA CCTACGCCTC
GCGCAGGAGG TCGACCTCCC GCCGTACCAC TACGGGCTCG TCTTCGAGCG CTGA
 
Protein sequence
MDRFRNTGQP DWDWWGRVWP TPGATLRQLG LVPGDRVVEI GSGNGYFALP AARIADPATV 
YAVDVDRSLL AELDALATEQ GIDNITAIKG DARALSELLP EPVDFALLAN AFHGIEDRTA
FVEAVAAALA VDGRFAVVNW RDRPREETMI GGEPRGPPTD LRLSPEATRR AVEEASDLRL
AQEVDLPPYH YGLVFER