| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2232 |
|---|
| Symbol | |
|---|
| ID | 7399941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2217609 |
|---|
| End bp | 2218103 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643709305 |
|---|
| Product | CBS domain containing membrane protein |
|---|
| Protein accession | YP_002566879 |
|---|
| Protein GI | 222480642 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.510755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGC GTGAGCTGAT GGAATCCGAC GTGAAGACGG TCGCCCCCGA CGACGACGTG
GCGGACGCGT TCAAGAAGTT CGCTCGCTAC CCGTTCAGCG GGTTCCCCGT CGTCGACGAG
GAGGATCGCG TGGTCGGCGT CGTCACCGAG TCCGACCTCG TGGACCTGTT CGAGCCGGAC
GACGAGACGC TGTGGATCCC GATCGGACTC CCGCCGTTCG TCGACACGCT CACTTATCAG
GTGAAGGCCC CGTGGGCCGA CCTCGATCTG GGCGTCGACA TGGTCCGGAA CGCCGACCGC
TTGATCTCGG ACGTGATGAG CACCGACGTG GCGACGGTGA CGCCCGACAC CGATGTCGAC
GAGGTACTCG ATCTACTCTC CGGCGACGAT CCGAACATCA ACCGTGTGCC GGTCGTCGAC
GACGATGGAC GGCTCGTCGG CATCATCGCC CGTCAGGACG TTATTCGGGC GTTCCGAGAC
AAGCGGCTGG CGTGA
|
|---|
| Protein sequence | MQARELMESD VKTVAPDDDV ADAFKKFARY PFSGFPVVDE EDRVVGVVTE SDLVDLFEPD
DETLWIPIGL PPFVDTLTYQ VKAPWADLDL GVDMVRNADR LISDVMSTDV ATVTPDTDVD
EVLDLLSGDD PNINRVPVVD DDGRLVGIIA RQDVIRAFRD KRLA
|
|---|
| |