Gene Hlac_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2207 
SymbolsucC 
ID7401142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2190338 
End bp2191483 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content66% 
IMG OID643709279 
Productsuccinyl-CoA synthetase subunit beta 
Protein accessionYP_002566854 
Protein GI222480617 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.499624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC ACGAACATCA AGCGAAGACT ATCTTCGCCG ACGCCGGGAT CCCGGTACCG 
GACTCCCGGC TCGCGACGAC CGTCGACGAG GCGCTCGACG CGGTCGACGA GATCGGCTAC
CCGGCCGCGA TCAAGGCGCA GGTCCACGTT GGCGGCCGCG GCAAGGCCGG CGGGATCAAG
ATCGCGACCG ACCGCGACGA GGCCGAGCAG TACGCCGAGG AGATCCTCGG GATGGATCTG
AAGGGGTACA CCGTCGATCA GATCCTCGTC GAACAGGGCG TCGACTTCGT CGACGAACTG
TACGTCGGCG TCACGATGGA CCGGGGCGAG GGACAGCCGG TTCTGATGGT CTCGACCGAG
GGCGGCGTGA ACATCGAGGA GGTCGCCGAG GAGAACCCCG ACGCGATCGC GCGCGAGCAC
GTCGACCCCG CGTTCGGGCT CCACCCGTAT CAGGCCCGCA AGGTCGTCTA CGAGGCCGGC
GTCGACGCCG ACGTGGCGCT GGACGTGGCC TCGATCCTCA CGACGCTGTA CGACCTCTAC
GAGGAGAACG ACGCCTCGGA GATTGAGGTC AACCCCGTGA TGATCACGAG CGACCGCGAC
GTGATCGCCG CGGACGCCGT GATGAACATC GACGAGGACG CGCTGTTCCG CCACCCCGAC
CTCGCCGAGA TGGCCGAGGA GTCCTACGAG GACGACTTAG AGCGGAAGGC CGGCGAGTAC
GGCTTCGACT ACGTCCGCCT CTCCGGGAAC GTCGGCATCA TCGGCAACGG CGCCGGGCTC
GTGATGACGA CCCTCGATCT GGTCGACTAC TACGGCGGCA AGCCCGCCAA CTTCCTCGAC
ATCGGCGGCG GCGCGAAGGC CGAGCGCGTC ACGAAGGCGC TCGACATGGT CTTCTCCGAC
GAGAACGTCG ATGCCGTCGT GTTCAACATC TTCGGCGGGA TCACTCGCGG CGACGAGGTC
GCCAAGGGGA TCAACGAGGC CCTAGAGCAG TTCGACGAGA TTCCCAAGAA GGTGGTCGTC
CGGCTCGCCG GCACGAACGC CGAGGAGGGG ATGGAGATCC TGAACACGGA TCTCGTGGAA
GTCGAGGAGA CGCTTGAGGA CGCGGTCCAG CGCGCGGTGA AGAACGCAGA GGAGGTGACC
CAATGA
 
Protein sequence
MKLHEHQAKT IFADAGIPVP DSRLATTVDE ALDAVDEIGY PAAIKAQVHV GGRGKAGGIK 
IATDRDEAEQ YAEEILGMDL KGYTVDQILV EQGVDFVDEL YVGVTMDRGE GQPVLMVSTE
GGVNIEEVAE ENPDAIAREH VDPAFGLHPY QARKVVYEAG VDADVALDVA SILTTLYDLY
EENDASEIEV NPVMITSDRD VIAADAVMNI DEDALFRHPD LAEMAEESYE DDLERKAGEY
GFDYVRLSGN VGIIGNGAGL VMTTLDLVDY YGGKPANFLD IGGGAKAERV TKALDMVFSD
ENVDAVVFNI FGGITRGDEV AKGINEALEQ FDEIPKKVVV RLAGTNAEEG MEILNTDLVE
VEETLEDAVQ RAVKNAEEVT Q