Gene Hlac_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2173 
Symbol 
ID7401106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2161628 
End bp2162509 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content72% 
IMG OID643709243 
ProductMOSC domain containing protein 
Protein accessionYP_002566820 
Protein GI222480583 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.470519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TCGCGGCGCT CGTCGCGTAC CCGCTGAAGT CGAACGACGG CGCCGCAGTC 
GACCGCGCCG AACTCGGGCC GAACGGCGCC CTCCGCGGCG ACCGTTCGTA CGCACTCGTC
GAAGCGGGCG TCGACCCGCA CACGACCTCA GTCGGCGGCG ACGGTGGCTA CGTCAACGGG
AAACGCGAGC CGGCGGTCCA CGGCCTCTTG GCGCGCTACG AACGTGTCGG CTCGGCCGAC
GCGACGCCGA CCGCGGTCAC CCTCTCGCGG CCGGCGCGTC CCGAGACTGG GGCCGCCGCG
GGCGAGCGCA CCTTCGCGCT CCCCGAGGAC AGCAAGGCGC TGGCGACGTG GGTCGGCGAG
TACCTCGGCT ACGGCGTCGA CCTTGTCCGC GAGCCGAACG GGGGGCTCCC AGACGACCGG
GCGGCGCCGG GGCCGACGGT CGTCTCGCGG GCGACGCTGG AGACGGTCGC CTCGTGGTTC
GACGAGATTG CTGACGCAAC GGAGATGCGG CGGCGGCTCC GGCCGAACCT CGTGCTCGAC
GACTGCCCGG CGTTCTGGGA GGACCGGCTG TTCGCCGACC ACGGAGAGGC CGTGCGCGTC
TCGATCGGAG CGACCGAGCT ATTCGGGGTC AATCCGTGTC AGCGGTGCGT CGTCCCCTCG
CGTGACCCGG ACACAGGCGA CGAGATCGAC GGGTTCCGCG AGACGTTCCT GCGGAAGCGC
CGCGAGACGC TCCCGGCGTG GACCGAGAGC GACCGGTTCG ACCACGACTT CCGGCTCATG
GTCAACACGG TCGTCCCGGA TGAGGAGTGG GGCTCGACGC TCGCGGTCGG CGACGCGGTC
GCCATCGAGG GTGTCGAACC GGAGCCGGAC AGCGAAACCT GA
 
Protein sequence
MARIAALVAY PLKSNDGAAV DRAELGPNGA LRGDRSYALV EAGVDPHTTS VGGDGGYVNG 
KREPAVHGLL ARYERVGSAD ATPTAVTLSR PARPETGAAA GERTFALPED SKALATWVGE
YLGYGVDLVR EPNGGLPDDR AAPGPTVVSR ATLETVASWF DEIADATEMR RRLRPNLVLD
DCPAFWEDRL FADHGEAVRV SIGATELFGV NPCQRCVVPS RDPDTGDEID GFRETFLRKR
RETLPAWTES DRFDHDFRLM VNTVVPDEEW GSTLAVGDAV AIEGVEPEPD SET