| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2172 |
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| Symbol | |
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| ID | 7401105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2160758 |
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| End bp | 2161564 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643709242 |
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| Product | proteasome subunit alpha |
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| Protein accession | YP_002566819 |
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| Protein GI | 222480582 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.151706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGCG GCAACGACCA GCAGGCGTAC GACCGCGGCA CGTCACTATT CTCGCCCGAC
GGCCGGATCT ACCAGGTCGA GTACGCCCGC GAGGCGGTCT CGCGCGGCGC GCCGAGCGTC
GGCGTCCGGA CGGCCGACGG CGTCGTCTTC GTCGCGATGT CCCGCCCCTC CTCGACGCTG
ATGGAGGCCG AGAGCATCGA GAAGCTCCAC AAGCTTGACG ACCACCTCGG CACCGCGAGC
GCCGGCCACG TCGCCGACGC CCGCCAGCTG ATCGACCTCG CGCGCCGCCA GTCGCAGGGG
AACCGCCTGC GCTACGGCGA GCCCGTCGGC GTCGAGACGC TGACGAAGTT CGTCACCGAC
CACATTCAGG AGAACACCCA GCGCGGCGGC ACCCGGCCGT ACGGCGCCGC GCTACTCATC
GGCGGCATCG ACAACGGCGA GCCGCGTCTG TTCGCCGCCG ACCCCTCTGG GACCCCCAAC
GAGTGGAAGG CGACCGTCAT CGGCGGCGGC CGCTCCGACA TCCAGGGCCA CCTCGAAGAG
AACTGGACCG AGGAGCTCTC GCTCGACGCT GGCGTCGAAC TCGCCATCGC CGCGCTCGCT
GCCCACGACG ACGAGTTCGA GCCGACGGAT CTGGCCGTCG CCACGGTCAC CGAGGCCGAC
GGCTACCGGA CCGTCCCCGT CGAGGAGGTC ACCGAGGCGT TCGAGGCGGC CGGGCTGACG
GTCGAAGAGG ACGACGAGGG TGACGAGGAA GAGGGCGCAG ACGCGGACGC CGACGACGAA
GCCACCGACG CCGACAACGA AGAGTAA
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| Protein sequence | MMGGNDQQAY DRGTSLFSPD GRIYQVEYAR EAVSRGAPSV GVRTADGVVF VAMSRPSSTL
MEAESIEKLH KLDDHLGTAS AGHVADARQL IDLARRQSQG NRLRYGEPVG VETLTKFVTD
HIQENTQRGG TRPYGAALLI GGIDNGEPRL FAADPSGTPN EWKATVIGGG RSDIQGHLEE
NWTEELSLDA GVELAIAALA AHDDEFEPTD LAVATVTEAD GYRTVPVEEV TEAFEAAGLT
VEEDDEGDEE EGADADADDE ATDADNEE
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