Gene Hlac_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2163 
Symbol 
ID7401096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2151241 
End bp2152470 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content70% 
IMG OID643709233 
Producthypothetical protein 
Protein accessionYP_002566810 
Protein GI222480573 
COG category[R] General function prediction only 
COG ID[COG2404] Predicted phosphohydrolase (DHH superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.491692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG AACTCATCGA CGAGGCGGAT ATCCCCCGTT CGCGGTACAC GCGACTGCCG 
GGAAAGGGCT TTTTCTACCC GGACTCGCTG GACGACGAGC GCGCCGAGAC GCGAGCGAAA
GAGGTCATCG AGGGGAGCGA GGCGATCGTG ATCGCCGACG GCGACGCCGA CGGGCTCGCC
TGCGCGGCGA TGGTCCGAGA GGCGTACGAC GCCGCGCTCG ACGCCGCGGA CTTCGAGGCG
GCCATCACGG CGCGGCTCGG CGACGGTGAG AGCGAGGCCG ACGACGGTGA TAGCGAGGAC
GACCCCACCG AGAACGCCCA CACGCAGTCG TCGGTCGGGC TGATCGCCGC CGGGCCGTAC
TCCATCGACA CGTCGCTCGA ACGCGTGCTC GCGTACGCCG ACGACGACGT GGACCTGTTC
GTCTGTGACC TCTGTCCCGA CGACTACAAG TGGATCGCCG AGCCGCTGGA GGCGCTCGCC
GAGTCGACCG CCTCGATCCG GTGGTTCGAC CACCACCAGT GGGACGAGTC GACGGCCGCC
GCCGTCCGCG ACCTCGGCGT CGACCTCGTC GTCGGCGAGT CCGACGAGGA GTGTACCGCC
GACGTGGCGC TCCGCTCGCT CGATCACGAC TTCGACGACC GGTGGGCCGA GCTGGCGGTC
GTGACGCGAG ACCACGACCT CTGGATCAAG GAGGACTCGC GCTCCGACGA CTTGGCCGAC
TACTCCTACT GGGCCGGCAG CGAGGAGTAC ACGACGATCG TGGGCGCGTA CGGCGCCGAT
CTCCCCGAAA CGGTCCGAGA GTTCGTCGCC GATCGGCGCG TCGAGAAGGA CGCTCGGATC
GACGCCGCCG TCGACCGCGC GGTCACCCAC GACATCGGCG AGTGGACCGT CGCGGTGACG
TACGGCCGCT GCTCGCAGAA CGAGGTCGCC GAGGCCCTTC GCGAGCAGGG TGCCGACGGC
GCCGTGATCG TCAAGCCCGC CGGCTCCGCG TCGATCCGCG GCTCCGAGGA CTTCCAGCAC
GCCCACGAGG TCGCCGGGAA GGTGAACGGG GGCGGCCACC CGCAGGCGGC CGGCTGCAAG
CCCGACATCT ACGACGACAT GCTCGACTAC GCACAGCACT GGACGACCGA GGGGCAGGCC
TGCAAGCGGG TCATCCTCGC GGCGTTCGAG GCGGTCGCGG AAGAGGTCGC GGCGGCGGAC
GAGTCGGACG AGACCGAAAC CGACGAGTAG
 
Protein sequence
MDDELIDEAD IPRSRYTRLP GKGFFYPDSL DDERAETRAK EVIEGSEAIV IADGDADGLA 
CAAMVREAYD AALDAADFEA AITARLGDGE SEADDGDSED DPTENAHTQS SVGLIAAGPY
SIDTSLERVL AYADDDVDLF VCDLCPDDYK WIAEPLEALA ESTASIRWFD HHQWDESTAA
AVRDLGVDLV VGESDEECTA DVALRSLDHD FDDRWAELAV VTRDHDLWIK EDSRSDDLAD
YSYWAGSEEY TTIVGAYGAD LPETVREFVA DRRVEKDARI DAAVDRAVTH DIGEWTVAVT
YGRCSQNEVA EALREQGADG AVIVKPAGSA SIRGSEDFQH AHEVAGKVNG GGHPQAAGCK
PDIYDDMLDY AQHWTTEGQA CKRVILAAFE AVAEEVAAAD ESDETETDE