Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2158 |
Symbol | |
ID | 7401091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 2146071 |
End bp | 2147246 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643709228 |
Product | histidine kinase |
Protein accession | YP_002566805 |
Protein GI | 222480568 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.249399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.778679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGGAC GGTACGACAC GCGGGACACG AGGGAGGGCC GACTGACGGA ACTGCTCGTG ACGCTCGGGG TCACCGAGCC GGACCACGTC TCCGTGGAGC CGGAGGGCGG GATCGCCCGC GTGGCCGCCG CGCTGTTCGT CTCGGTTTCG GGATTCGCCC TGCTGATCCC GAACGTGACC CCGCTGGTCT CGGGAGGCGA ACCCCCGATC GGGATCGCCC TCTCGGTGCT GGGGACCGTG CTTTCGGTCG CGCTGGTGCT CGTCGGCGGG CTCTTATACA GGAGCACGTT CACAACGCGC AACGCGGTCC GCATCGCCGT CTGGAGCCTC TTCGGGATCG TCGTGCTCGG CGGGATCATG CTCGGGATCA TCCGGTATCA GGCGCAGCTC GGGACGCCGA TGGTCGCGCC CACCTTCACG GTCGCGAAGG TGCTCTCGAT CGGCGCAGTC GCACACGTGA TCATCGGGGT CTACGACGCC CGACGGGTCC GCGCCCAGCA GCTCGCCAAT GAGCAGCGCC GAGTCTCCGT GCTGAACCGG ATGATCAGGC ACAACCTCCG AAACGAGACG ACGGTGCTCG GCGGGCACGC GTCGCTGATC GCCGAGCGCG TCGACGATCC GGAACTCCGC GACTCGGCTG AGGCGGTGGC GAAGAGTGCC GCAGTGATCG GCGGGCTCGC TAAGGATGCG AACCGGCTAC AGGCTGCCTT CGAACGTCGC CCCGACGCGC GTGGGGCGGT CCCGGTCGAG CCGCTGATCG AGGACGCCGC CGAGGCCGCC CGCGAGGCCG GCGCCGAGAC CGTCGCGGTC GATGTCGAGC CCTGCGCGGC GCTGGCCGAC GACCGGCTCG CGACCGCGGT CGAGGAGCTC GCGACGAACG CGCCCGAACA CGGCGCGACC GCGGTCGAGC TATCGGCTCG CGCGGTCGAC GGCGGCGTCG AAATCGCCGT CACCGACGAC GGTCCCGGGA TCCACGAGTC CGAGAGCCGC GTGATCACCG GTCGCGACCC GGAGACGCAA CTGGAGCACG CGAGCGGGCT CGGGCTTTGG ATCGTCCGGG CGACCGCCGA CGCGTTCGAC GGGTGGCTGT CGATCGAGAC GAGGCGCGCG GGCGACGAGG GCGCGAGCGA CGACGAGACC GGCACGACGG TGACGATCGG GGTTCCGGCA CCGTAG
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Protein sequence | MTGRYDTRDT REGRLTELLV TLGVTEPDHV SVEPEGGIAR VAAALFVSVS GFALLIPNVT PLVSGGEPPI GIALSVLGTV LSVALVLVGG LLYRSTFTTR NAVRIAVWSL FGIVVLGGIM LGIIRYQAQL GTPMVAPTFT VAKVLSIGAV AHVIIGVYDA RRVRAQQLAN EQRRVSVLNR MIRHNLRNET TVLGGHASLI AERVDDPELR DSAEAVAKSA AVIGGLAKDA NRLQAAFERR PDARGAVPVE PLIEDAAEAA REAGAETVAV DVEPCAALAD DRLATAVEEL ATNAPEHGAT AVELSARAVD GGVEIAVTDD GPGIHESESR VITGRDPETQ LEHASGLGLW IVRATADAFD GWLSIETRRA GDEGASDDET GTTVTIGVPA P
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