| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2147 |
|---|
| Symbol | |
|---|
| ID | 7401080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2135330 |
|---|
| End bp | 2136154 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643709217 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002566794 |
|---|
| Protein GI | 222480557 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGGCG TGAACGACGG GTCGATGGCC GAGACCGATA CGGACGGAGA CGCCGAGCGC
GCCGTCGAGG AGTCCGGCGT CGCCGTCGAC CGCATCGGGA AGACGTACGA GGGCAACGGC
GACGGTAATC CCGTCCGCGC GCTCGACGAC GTCTCCTTCG CGGTCGACGA GGGGGAGTTC
GTCTGTCTCG TCGGCCCCTC CGGCTGCGGG AAGACGACGC TGTTCCGGAT CATCGCCGGA
CTCGCGGAGG CCACCGACGG CGAGGTCCGC CTCGCCGGCA CCCCGGTCAC CGGGCCGACG
ACGGACATGG GCGTCGTCTT CCAGGAGTAC CACCTGTTCC CGTGGCTCAC GGTCGAGGAG
AACGTCGGCT TCGGGCTCGA ACGGAGCGAC CGCTCCGAGG CGGAGCAGGC AGAGCGGGTC
GACGAGATGC TCGACCTCGT CGGGCTCACC GAGTTCCGCG ACTCGCACCC GAAGTCGCTC
TCGGGCGGGA TGAAACAGCG CGTCGCCATC GCGCGGTCGC TCGCGGTCGA CCCCGAACTA
CTCTTAATGG ACGAGCCGTT TGGCGCGGTC GACGCCCAGA CCCGGGAGAT GCTGCAGCGC
GAGCTGCTCG ACGTGTGGGG GTCGACCGGC AAGACCGTCC TGTTCGTCAC GCACGACGTG
GCCGAGGCGG TGACGCTCGC AGACCGGATC GTCGTGATGG CGGCCGAACC CGGTCGCGTC
GCCGAGCTCG TCGATGTCGA CGTGCCGCGA CCGCGCGAGC GCGGCGACCC CGCTTTCGGC
GAGCATGTCG CCCGCGTGCG GGAGCTGATC GGCGCGGGGC CCTAA
|
|---|
| Protein sequence | MAGVNDGSMA ETDTDGDAER AVEESGVAVD RIGKTYEGNG DGNPVRALDD VSFAVDEGEF
VCLVGPSGCG KTTLFRIIAG LAEATDGEVR LAGTPVTGPT TDMGVVFQEY HLFPWLTVEE
NVGFGLERSD RSEAEQAERV DEMLDLVGLT EFRDSHPKSL SGGMKQRVAI ARSLAVDPEL
LLMDEPFGAV DAQTREMLQR ELLDVWGSTG KTVLFVTHDV AEAVTLADRI VVMAAEPGRV
AELVDVDVPR PRERGDPAFG EHVARVRELI GAGP
|
|---|
| |