Gene Hlac_2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2130 
Symbol 
ID7400650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2120739 
End bp2121824 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content68% 
IMG OID643709200 
Productputative transcriptional regulator, AsnC family 
Protein accessionYP_002566777 
Protein GI222480540 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.826373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGG TCGACGCAGA TCTGACGGCG CTCGACCGCG GGATCATCAA CGCCTTTCAA 
GGCGGATTCC CGGTGACCGA GCGCCCCTTC GAACCGGCCG CGGCCGCGCT CCGCGAGCGC
GGGATCGACG TGACCGGCCC GGAGCTGTGC GAGCGCGTGC GCGAACTCGA CGAGGCGGGG
ACCCTCTCCC GGTTCGGGGC GCTCGTCAAC GCCGAGGAGA TCGGCGGAGC GGCCTCGCTC
GTCGCGATGC ACGCCCCCGA AGACCGGTAC GAGGAGATCG CGGAGACGGT CAACGAGTTC
ACCGCGGTGG CGCACAACTA CGAGCGCGAG CATCCCCACC TCAACATGTG GTTCGTCGTG
AGCGTCGCCG ACCACCCGGA TCCCGACAAG GACGGGAGCG ACCGGGTCGA CGAGGTACTC
GCGGAGATCG AGGCCGCGAC CGGGCAGGAG ACGTACAACC TCCCGAAGGT TCGCGAGTTC
CACGTCGGCG CGAAGTTCCT CGTCGACGGC CCGGTTCCCG ACGGCGAGAT CGACCTCTCG
GATCTGGGGC CCGCGGTTTC GGCCAGCGGC CGGTCGACGC TCACCCTCGA CGAGCGCGAC
CTCGTCGTCG AGATTCAGGG CGGACTCCCG ATCACGGAGA TGCCGTACGC CGACGTGGCG
GCCGCGATCG GCGCCGAGGT CGACTGGGTG ATCGAGACGA TCAAGCGGTT CAACGCGGAG
GGGAAGGTGC GCCGCGTCGG CGTCATCCCG AACCACTACG CGCTCGGGTA CACCGAGAAC
GGGATGACCG TCTGGGACGT GCCCGAGGAC GCGCTCGACG AGGTCGGGCC GGTCGTCGCG
AGGCTCGACT TCGTCACCCA CTGTTACGAG CGACCCCGGC ACGCGGGCGT CTGGGAGTAC
AACTTCTTCG CGATGACCCA CGGGCGGACG GAGGCCGAAA GCGAGCGCCG GATCGCGGAG
GTCAAAGAGC TGATGGACGA GTACTGGGAA GTCGGCGAGA GCGACTGGGA CACGCTGTTC
TCGACCCGAA TCTTGAAGAA GACGGGGATC CGCATCGCTG ACCGCGCCGA CAGCAACACC
GCGTGA
 
Protein sequence
MQEVDADLTA LDRGIINAFQ GGFPVTERPF EPAAAALRER GIDVTGPELC ERVRELDEAG 
TLSRFGALVN AEEIGGAASL VAMHAPEDRY EEIAETVNEF TAVAHNYERE HPHLNMWFVV
SVADHPDPDK DGSDRVDEVL AEIEAATGQE TYNLPKVREF HVGAKFLVDG PVPDGEIDLS
DLGPAVSASG RSTLTLDERD LVVEIQGGLP ITEMPYADVA AAIGAEVDWV IETIKRFNAE
GKVRRVGVIP NHYALGYTEN GMTVWDVPED ALDEVGPVVA RLDFVTHCYE RPRHAGVWEY
NFFAMTHGRT EAESERRIAE VKELMDEYWE VGESDWDTLF STRILKKTGI RIADRADSNT
A