Gene Hlac_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2118 
Symbol 
ID7400638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2108378 
End bp2108902 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content70% 
IMG OID643709188 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002566765 
Protein GI222480528 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.154407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CGACCGCCGA CGGTCCGGGG GACGACCGGA ACGACAGCGA CGCGACGGGC 
GACTCCACTC CGAGCGATCG CAAGTACGTC GACCGGGCGA TCGAACTCGC CGAGGAAGCC
GTCGAGATGG GGAACACGCC GTTCGGTGCG CTGCTCGTCC TCGACGGCGA GATCGTCGCC
GAGGCCCACA ACGAGACGCT GACCGAGGAC GATCTGGCGG CCCACCCGGA ACTGGCGCTC
GCGCGGTGGG CCGGCCGCGA GCTCGACGTC GACGAGCGCG CCCGCTGTAC GATGTACGCC
AGCACGGAGC CATGCCCGAT GTGTGCGACC GGGATCCACT ACGCCGGGAT CGGTCGGGTC
GTCTTCGGCG TCGCGGGCGA GACGCTCGAC GGGCTCACCG GCGACGCGGT GTCGATCCCC
TGCGCGGAGG TGATCCGCCG GGCCGGCGGC GACACGACCG TCGAGGGACC GATCGCCGAG
GCGGCCGCCA TGGAACTCCA TGAATCGGTG TACGGTGAGT CGTAG
 
Protein sequence
MTDSTADGPG DDRNDSDATG DSTPSDRKYV DRAIELAEEA VEMGNTPFGA LLVLDGEIVA 
EAHNETLTED DLAAHPELAL ARWAGRELDV DERARCTMYA STEPCPMCAT GIHYAGIGRV
VFGVAGETLD GLTGDAVSIP CAEVIRRAGG DTTVEGPIAE AAAMELHESV YGES