| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2105 |
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| Symbol | |
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| ID | 7400625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2095467 |
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| End bp | 2096711 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643709175 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002566752 |
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| Protein GI | 222480515 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0600957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.059013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCGG TCGTCCTCAC GCAGTTCGCG ACAGCTCTCC TCGGCCCCCT CGCGCAGTTC
GCGACGGCTC TCCTCGGCCC CCTCGGTGAC ATCTACGGGG TGGTGACGGG GAACGCCCAG
CGCGTCGCAG TCTCCGCACT GATCGTCGCC GCCGTGCTCG TCGTTCGACT GCTCACCGGG
TGGCTAAAAC GGCGGAACGG GGAGCTCTCC TCGGTGCGGC GGCTCCTGCT GTCGATAACG
GTCGCCGGAG CCACCGCAGT CGGCGCGCTC TCCCTGCTCG TGGTGTGGGA CCGCAGCGGG
GCGCTCCTCG ACGCGTACGA GTCGGCGGCG ATCGCGGACC AGCTGTCGAA CGTCGTGCTC
GCGGTAGTGC TCTTGGCGAG CGCCTATGCG GTCACGGACT TCCTCGGGGG CGTCATCCGC
GAGATCTCTG CCGAGAGCAC GGTGCTCACC GATCACCAAG AAGAGGTGAT CCGGCGGCTC
GCCCAGATAT CGGTGTACAC CTTCGCGCTT TTGGTCGTCG TCGGACTGTT CACCGACAAC
GTCGGTGGCC TCCTCGTCGG TGCCGGGTTC CTCGGGATCG TGGTCGGCAT GGCGGCCCGC
CAGACGCTCG GCGCGATCCT CGCCGGCTTC GTGTTGATGT TCTCCCGCCC GTTCGAGGTG
GGCGACTGGG TCGAGATCGG CGACCACGAA GGGACCGTTA CGGAGATCTC GATCATGAGC
ACCCGCCTCC GGTCGTTCGA CGGCGAGGTG ATTACGCTCC CGAACGACGA CGTGCGATCG
GGATCAATAA TCGACCGGTC ACGCCGGAAC CGCTACCGGA TCGAGATCGA GGTCGGCCTC
GACTACGACA CCGACATCGA ACGCGCGGCG ACGGTGATCG AGGAGACCAC CACCGAGGTC
GAGGACGTGG CCGCGATGCC CGAACCGAAC GCCGTGACGA AGCGGTTCGG CGACTCGGCG
GTCGTGCTCG GACTCCGCTA CTGGATCCGG AACCCCAGCA TGCGCAAGCG CTGGCGCACG
CAGACCGCCG CGATGAACGC GATCAAGCCG GCGCTCGACG AGGAGGGGAT CGTGATCCCC
TTCCCGCAGC AGACGCTCTC CGCGCGGGAT GTGGACGCCT CCGGCCCACA ACTGGACGCG
TCAGTCGAGG GGCGCGCGGC GACGCGCGGC GGGTCCCACT CGGGCGAGGA CGATGGCTCC
GACGCCGAGA GCGACACCGA AGGATCGGGG GAGTCGGGCC GATGA
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| Protein sequence | MIAVVLTQFA TALLGPLAQF ATALLGPLGD IYGVVTGNAQ RVAVSALIVA AVLVVRLLTG
WLKRRNGELS SVRRLLLSIT VAGATAVGAL SLLVVWDRSG ALLDAYESAA IADQLSNVVL
AVVLLASAYA VTDFLGGVIR EISAESTVLT DHQEEVIRRL AQISVYTFAL LVVVGLFTDN
VGGLLVGAGF LGIVVGMAAR QTLGAILAGF VLMFSRPFEV GDWVEIGDHE GTVTEISIMS
TRLRSFDGEV ITLPNDDVRS GSIIDRSRRN RYRIEIEVGL DYDTDIERAA TVIEETTTEV
EDVAAMPEPN AVTKRFGDSA VVLGLRYWIR NPSMRKRWRT QTAAMNAIKP ALDEEGIVIP
FPQQTLSARD VDASGPQLDA SVEGRAATRG GSHSGEDDGS DAESDTEGSG ESGR
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