Gene Hlac_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2103 
Symbol 
ID7400623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2093850 
End bp2094428 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID643709173 
ProductProtein of unknown function DUF655 
Protein accessionYP_002566750 
Protein GI222480513 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1491] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0789741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0844526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CCGAAACCGA CGCGCCCGCC GCGGACGACG GTCCCGTGGT CGTCCTGTTG 
GACGTGTTGC CCAACGGACG GCCGGACGAC GACCGCCCGC AGTACCGGAA GTCGCCGGTC
GCGTACGGGC TCGGCACGGA CGCATTCCGG CTGTACGAGC TCACGCTCGA CGAGGAGGCG
GACGTCTCCG TGAGCCACCG GCTTGCGCTC GACGGACCGG CCGTCGGTCG GTACCGCGAG
GTGTCGTTCG ACGACCTCAC CCGGAACGCG GCCGCCGAGA TCGAGTACGC GGTCGAGGAC
ATCGTCGAGG GCGATGAGAA GCGGTTCGTC GACTTCTACA ACGAGGCCGG GCCGATCACG
CTCCGGCTCC ACCAGCTCAA CCTCCTGCCG GGGATCGGCA AACAGCTCCG GAACAAGGTA
CTCGACGAGC GAAAGCGCGG CCCCTTCGAG AGCTTCGAAG AGGTCTCAGA GCGCGTCACC
GGGCTCCACC ACCCGCGGGA GGTGCTCGTC GAGCGGATCG TCGAGGAGAT TCACGAGGAG
GATCTCAAGT ACCGGCGGTT CGTCGGTTAC GAGGAGTGA
 
Protein sequence
MTDPETDAPA ADDGPVVVLL DVLPNGRPDD DRPQYRKSPV AYGLGTDAFR LYELTLDEEA 
DVSVSHRLAL DGPAVGRYRE VSFDDLTRNA AAEIEYAVED IVEGDEKRFV DFYNEAGPIT
LRLHQLNLLP GIGKQLRNKV LDERKRGPFE SFEEVSERVT GLHHPREVLV ERIVEEIHEE
DLKYRRFVGY EE