Gene Hlac_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2096 
Symbol 
ID7400616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2086278 
End bp2087171 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content66% 
IMG OID643709166 
ProductABC transporter related 
Protein accessionYP_002566743 
Protein GI222480506 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.185907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0132496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCG ACATTCCGGA CGCGTCCGAC GTCGCTGACG GAGCAGATGC GACCGCGGCG 
TCGACCGACG AACCCGAGGC AAACGACAGC GCGGTCGAGG AGGCGGCAAA GCACGTCCCG
TCCGGAGCGC CGCCGCTCCG AGTCGAGGGA CTCGTCAAGC GCTTCGGCGG CGTCACCGCC
GTCGACGGCG CCTCCTTCGA GGTCGAACAG GGGTCGCTGA CGGGGCTGAT CGGTCCCAAC
GGCGCTGGCA AGTCGACCAC GTTCAACTGC ATCACCGGCG TTCACGAGCC GACGGCGGGG
TCCGTCTACT TCAAGGGCGA GGACGTCACC GGGCTCGAAC CGTACCGGAT GGCGCGGAAG
GGGCTCGTGC GGACCTTCCA GATCGCCCGC GAGTTATCGG AGATGACCGT ACTGGAGAAC
CTGATGCTCG CGCCGAAAGG GCAGATCGGC GAGTCGGCGA TCCGGTCGGT CACGCCCGGG
CTCCGGGGCG AGGTCGTCGC ACAGGAGGAG GAGATCCGCG AGCGCGCCTG GGAGACCCTC
GACTTCTTCG AGATCGACCA CCTCGCGACC GAACACGCCG GCAACCTCTC CGGAGGCCAG
CGGAAGCTCC TGGAGATGGC GCGCGCGCTC ATGACCGACC CGGAGGTGGT TCTCCTCGAC
GAGCCGCTCG CGGGCGTCAA TCCCACGTTA GAGGAGAAGC TCCTCGATCG GATCCACCAG
CTGCGCGAGG ACGGCTACAC GTTCCTCCTC GTCGAACACG ATATGGACGT TATCATGAAC
AACTGCGAAC ACGTCATCGT CATGCACCAG GGCAGCGTTC TCGCCGAAGG GACCGGCGAC
GAGATACGGA ACAACGAACA GGTCATCGAG GCGTACCTGG GGGAGGACAT ATGA
 
Protein sequence
MSSDIPDASD VADGADATAA STDEPEANDS AVEEAAKHVP SGAPPLRVEG LVKRFGGVTA 
VDGASFEVEQ GSLTGLIGPN GAGKSTTFNC ITGVHEPTAG SVYFKGEDVT GLEPYRMARK
GLVRTFQIAR ELSEMTVLEN LMLAPKGQIG ESAIRSVTPG LRGEVVAQEE EIRERAWETL
DFFEIDHLAT EHAGNLSGGQ RKLLEMARAL MTDPEVVLLD EPLAGVNPTL EEKLLDRIHQ
LREDGYTFLL VEHDMDVIMN NCEHVIVMHQ GSVLAEGTGD EIRNNEQVIE AYLGEDI