Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2096 |
Symbol | |
ID | 7400616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2086278 |
End bp | 2087171 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643709166 |
Product | ABC transporter related |
Protein accession | YP_002566743 |
Protein GI | 222480506 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.185907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0132496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCG ACATTCCGGA CGCGTCCGAC GTCGCTGACG GAGCAGATGC GACCGCGGCG TCGACCGACG AACCCGAGGC AAACGACAGC GCGGTCGAGG AGGCGGCAAA GCACGTCCCG TCCGGAGCGC CGCCGCTCCG AGTCGAGGGA CTCGTCAAGC GCTTCGGCGG CGTCACCGCC GTCGACGGCG CCTCCTTCGA GGTCGAACAG GGGTCGCTGA CGGGGCTGAT CGGTCCCAAC GGCGCTGGCA AGTCGACCAC GTTCAACTGC ATCACCGGCG TTCACGAGCC GACGGCGGGG TCCGTCTACT TCAAGGGCGA GGACGTCACC GGGCTCGAAC CGTACCGGAT GGCGCGGAAG GGGCTCGTGC GGACCTTCCA GATCGCCCGC GAGTTATCGG AGATGACCGT ACTGGAGAAC CTGATGCTCG CGCCGAAAGG GCAGATCGGC GAGTCGGCGA TCCGGTCGGT CACGCCCGGG CTCCGGGGCG AGGTCGTCGC ACAGGAGGAG GAGATCCGCG AGCGCGCCTG GGAGACCCTC GACTTCTTCG AGATCGACCA CCTCGCGACC GAACACGCCG GCAACCTCTC CGGAGGCCAG CGGAAGCTCC TGGAGATGGC GCGCGCGCTC ATGACCGACC CGGAGGTGGT TCTCCTCGAC GAGCCGCTCG CGGGCGTCAA TCCCACGTTA GAGGAGAAGC TCCTCGATCG GATCCACCAG CTGCGCGAGG ACGGCTACAC GTTCCTCCTC GTCGAACACG ATATGGACGT TATCATGAAC AACTGCGAAC ACGTCATCGT CATGCACCAG GGCAGCGTTC TCGCCGAAGG GACCGGCGAC GAGATACGGA ACAACGAACA GGTCATCGAG GCGTACCTGG GGGAGGACAT ATGA
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Protein sequence | MSSDIPDASD VADGADATAA STDEPEANDS AVEEAAKHVP SGAPPLRVEG LVKRFGGVTA VDGASFEVEQ GSLTGLIGPN GAGKSTTFNC ITGVHEPTAG SVYFKGEDVT GLEPYRMARK GLVRTFQIAR ELSEMTVLEN LMLAPKGQIG ESAIRSVTPG LRGEVVAQEE EIRERAWETL DFFEIDHLAT EHAGNLSGGQ RKLLEMARAL MTDPEVVLLD EPLAGVNPTL EEKLLDRIHQ LREDGYTFLL VEHDMDVIMN NCEHVIVMHQ GSVLAEGTGD EIRNNEQVIE AYLGEDI
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