Gene Hlac_2095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2095 
Symbol 
ID7400615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2085451 
End bp2086281 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content66% 
IMG OID643709165 
ProductABC transporter related 
Protein accessionYP_002566742 
Protein GI222480505 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.156364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0133806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG AGGAGGCCGA CTCCGTCGAC GAAAACCCCG TCGACGACTC TGTCGACTCC 
GACGACACAC CCGTCGCCGC CGACATGGAC GACACTGATG CGGGAACGAC CCACACGCTC
GACGGCGACG CGATCCTCCG GCTCCGCGAC CTCGACGCTG GCTACGGCGA CCTCCAGATC
CTCTCTGACG TCGATCTCGA CGTCGCCGAC GGGGAGTACG TCACCATCGT CGGCCCCAAC
GGCGCCGGCA AATCGACCGT GATGAAGACC GTCTTCGGGC TCACGACGTA CATGGACGGC
ACCGTCGAGT TCGAGGGCGA GCCGATTCAC GGGCTCGCGC CCGAGCAGAT CATCCGCGAG
GGGATCGGGT TCGTCCCGCA GACCGACAAC GTGTTCCCGG GTCTGAGCGT GCGCGAGAAT
CTCGAAATGG GCGCGTACAT TCTCGACAGC GTCCCCGAAG ACCAGATCGA AGAGATTTAC
GACCGCTTCC CGATCCTCCG AGAGCGGTCG GGACAGAAGG CAGGGACGCT TTCGGGCGGC
CAGCGGCAGA TGGTCGCGAT GGGGCGGGCG CTCATGCTCG ATCCGGATCT ACTGCTGCTC
GACGAGCCCT CCGCGGGGCT CGCGCCCGAC CTCGTCGCCG ACATGTTCGA TCGGATCGAC
CGGATCAACG ACTCGGGAAC GGCGGTACTC ATGGTCGAGC AGAACGCCAA GGAAGCGCTC
CGGCGCTGTG ACCGCGGCTA CGTCCTCGTC AACGGCGAGA ACCGCTACAC CGACCGCGGA
GAAGTGCTGC TCGGCGACGA GGACGTGCGG AAGGACTTCC TCGGCGGGTG A
 
Protein sequence
MSVEEADSVD ENPVDDSVDS DDTPVAADMD DTDAGTTHTL DGDAILRLRD LDAGYGDLQI 
LSDVDLDVAD GEYVTIVGPN GAGKSTVMKT VFGLTTYMDG TVEFEGEPIH GLAPEQIIRE
GIGFVPQTDN VFPGLSVREN LEMGAYILDS VPEDQIEEIY DRFPILRERS GQKAGTLSGG
QRQMVAMGRA LMLDPDLLLL DEPSAGLAPD LVADMFDRID RINDSGTAVL MVEQNAKEAL
RRCDRGYVLV NGENRYTDRG EVLLGDEDVR KDFLGG