Gene Hlac_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2081 
Symbol 
ID7400601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2068072 
End bp2069301 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content69% 
IMG OID643709152 
ProductRadical SAM domain protein 
Protein accessionYP_002566729 
Protein GI222480492 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.214481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.184464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCG TCAGCAAGCT CCTCTGTGGG CTCGACGCCG AAAGCGACGG GCTCCGATAC 
GACGCGGCCG ACGGGTCGAA AAAACCCCAG ATCACGGACG ACAAACAGCA ACGCCCGGTC
GTCGTCTGGA ACACCACGAA GCGGTGTAAC CTCTACTGCG AGCACTGCTA CGCCGCGGCC
GATCAGGAGG AAGCGCCGAA CGAGCTGTCG ACCGCGGAGG GGAAGGCGCT CATCGACGAC
CTCGCCGAGT TCGGGGTGCC GGTGCTCCTG TTCTCCGGCG GGGAGCCGCT CGTCCGCGAG
GACCTCCTGG AACTGATTGC ACACGCCGCC GACAGCGGCG TCCGTCCCGT GCTCTCGACG
AACGGGACCC TCCTGACTCG CGACCGTGCC CGCGAGTTGA AGCAGGCGGG GCTCAAGTAC
GCGGGCGTCT CGGTCGACGG TCTCCCCGAG CGCAACGACC GCATTCGGGG CGAAGAGGGC
GCGTTCGACG CCGCGGTCCG GGGGATCGAG GCGTGTCTCG ACGTGGGGCT CAAGACCGGG
CTCCGGTACA CGATCACCGA GCACAATGTC GAGGACCTCG CGGGCGTCGT CGACCTGCTC
GTCGACGTGG GCGTCGACCG GTTCTGCTTC TACCACCTCG ACTACGGCGG GCGCGGCGCC
GACATCTCCG ACGTGGATCT GAGCCCCGAG GCGACCCGGA AAGCGGTCAC CGACCTGTGT
GACCTCACCC GCGAGTACCA CGAGTCGGGC GAGGAGATCG AGACGCTGCT CGTCGGCAAC
TACGCCGACG CGGGCCACCT CGTCGAGTAC GCCGACCGCG AGATGGGGAC CGATCGCGCA
CAACGAATCT ACCGGTACCT CGAACGCAAC GGCGGCGACC CGACCGGCGA GCGCGTCGCC
GACGTGGACC CCGTCGGTAA CGTTCACCTT ACGCAGTTCT GGCAGGGATA CTCGCCCGGG
AACGTCAGAG ACCGATCGTT CGGCGCGATC TGGTCGGACA AGTCGAACCC GCTTCTCGGG
GCGCTCCGCG AGCGCGAAGA TCACCTCTCG GGGAAGTGCG CCGACTGCGC GTACCAGAGC
GTCTGCCGCG GCGGCTCGCG GCTGCGCGCG CTGGCGGCCC ACGACGACCC GTTCGCGCCC
GACCCGAAGT GCTACCTCAC CGAGGCCGAA CGCGACGGGG AGGCCGCAAT GAGTCGGATT
CGAGGCGGGC CGGCCGCCGA CGCGGACTGA
 
Protein sequence
MISVSKLLCG LDAESDGLRY DAADGSKKPQ ITDDKQQRPV VVWNTTKRCN LYCEHCYAAA 
DQEEAPNELS TAEGKALIDD LAEFGVPVLL FSGGEPLVRE DLLELIAHAA DSGVRPVLST
NGTLLTRDRA RELKQAGLKY AGVSVDGLPE RNDRIRGEEG AFDAAVRGIE ACLDVGLKTG
LRYTITEHNV EDLAGVVDLL VDVGVDRFCF YHLDYGGRGA DISDVDLSPE ATRKAVTDLC
DLTREYHESG EEIETLLVGN YADAGHLVEY ADREMGTDRA QRIYRYLERN GGDPTGERVA
DVDPVGNVHL TQFWQGYSPG NVRDRSFGAI WSDKSNPLLG ALREREDHLS GKCADCAYQS
VCRGGSRLRA LAAHDDPFAP DPKCYLTEAE RDGEAAMSRI RGGPAADAD